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HIV and METH: An unpredictable storm

Authorsgammon
Date

January 6, 2016

 

Research has shown that methamphetamine (METH) use among HIV-positive individuals may be as high as 25%, compared with a national average of less than one percent. On its own, METH can cause irreparable physical, psychological, and social damage to individuals who abuse or become dependent on the drug. For HIV-positive patients, particularly individuals undergoing treatment with antivirals, the combined effects of METH and HIV infection on the central nervous system are particularly concerning.

A new study by SBP researchers evaluates the neuronal damage caused by HIV proteins, METH, and combinations of antiretroviral drugs (ARVs). Combinations of ARVs are the most common treatment for HIV-positive individuals, and are credited for increasing the survival of patients to near normal life spans. The results, published in Antimicrobial Agents and Chemotherapy, are surprising.

  • The overall positive effect of ARVs—keeping patients alive—comes with a downside. Certain ARV drug combinations are neurotoxic.
  • Some combinations of HIV, ARVs and METH increase neuronal impairment, while others have no additive effect. And the results are unpredictable.

“Our finding that ARVs can be neurotoxic is concerning,” said Marcus Kaul, PhD, associate professor in the Immunity and Pathogenesis Program at SBP. “We already know the virus on its own can cause a condition called HAND, which stands for HIV-associated neurocognitive disorders. That’s a fancy way of describing changes in memory, concentration, attention, and motor skills that affect up to 50% of HIV-positive patients.”

“Since the goal is to keep HIV-positive patients alive and healthy, it’s important to learn if the treatments we use to prolong life have unwanted side effects. Our research suggests that some ARV combination therapies aggravate neurocognitive decline. ”

Adding methamphetamine to the mix further complicates matters.

“We found that even though METH on its own is toxic to neurons, with some combinations of ARVs, we observe increased neuronal impairment, but in other combinations there is no additive affect. This means that the neurocognitive effects of METH may depend on the ARV combination prescribed to the patient.”

The study tested four of the most commonly used ARTs in the presence and absence of METH and gp120, a neurotoxic HIV protein that sits on the surface of the virus but can also be released from infected cells. The researchers used an in vitro system to assess neuronal damage produced by various combinations of the drugs and virus protein. Damage was measured by assessing the number of neurons and quantifying components of their processes and synapses. The analysis also included measurement of neuronal ATP levels—the main energy source of cells. Measuring ATP levels is a well-established method for evaluating toxicity. A reduction in ATP levels is indicative of cell damage.

“In a perfect world we would be able to predict which ARV therapy combinations are best suited to HIV-positive individuals prone to recreational drug use. While we are probably a few years from this degree of personalizing HIV treatment, in the short term the information adds to our understanding of the pathways and mechanisms that lead to neurocognitive decline and dementia, so the lessons we learn may ultimately be applied more broadly to neurological disorders,” Kaul added.

 

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NIH funding gets biggest increase in 12 years

Authorsgammon
Date

December 28, 2015

The National Institute of Health is getting a $2 billion funding increase, giving biomedical research institutions a good reason to celebrate the new year. The increase represents a big turnaround for the agency that has been working with a stagnant budget since 2003. The funding boost promises to ignite the science—and the scientists—that rely on government funding to find new ways to prevent disease and improve health.

“NIH funding fuels some of the most important, influential research that expands our understanding of diseases, and funds new approaches to prevent, diagnose, treat, and in some cases even cure illnesses that impact world health,” said Kristiina Vuori, MD, PhD, president of SBP. “This increase in NIH funding will help SBP—and similar biomedical medical research institutions—to continue to make groundbreaking scientific discoveries and translate our findings into applied medicine for the benefit of patients.  We couldn’t be more pleased.”

SBP, which ranks in the top four of NIH awards to independent research organizations, has a big reason to celebrate.  Almost 50% of the funding for our primary research areas—cancer, neuroscience, immunity, and disorders of the metabolism—comes from NIH grants. Moreover, the money helps support the more than 800 scientific staff at SBP that are directly making and advancing our discoveries.

Included in the $2 billion are $200 million for precision medicine, an additional $350 million for Alzheimer’s disease research, and $85 million for the BRAIN Initiative—the project to map the human brain.

The approval of the spending bill is a significant bipartisan achievement by a Congress that became convinced that investing in medical science is a good use of taxpayer money.

Congratulations to all involved, especially NIH Director Francis Collin for his ongoing efforts to bring this to a successful outcome.

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SBP’s Sheila Collins’ diabetes research featured in Orlando Sentinel

Authorsgammon
Date

December 21, 2015

“Obesity has reached epidemic proportions in the United States. Over 60 percent of the population can be classified as overweight or obese, placing them at risk for a large number of chronic diseases, including insulin resistance, cardiovascular disease, and type 2 diabetes,” says Sheila Collins, PhD, professor at SBP’s Lake Nona campus.

“There is a critical need for novel approaches to treating obesity—in particular, agents acting to increase energy expenditure would be valuable.”

Read the article in the Orlando Sentinel by Naseem S. Miller about how Collins is studying hormones produced by the heart to prevent obesity and possibly the myriad of disorders that come with it.

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The Future of Neuroscience Workshop

Authorsgammon
Date

December 14, 2015

On Tuesday, December 2, SBP held “The Future of Neuroscience Workshop,” an event where SBP faculty shared their findings on what causes neurological disorders and presented their ideas on new directions and approaches to treat brain diseases.

It’s estimated that more than 50 million Americans are affected by neurological disorders. However, many disorders do not have an approved treatment or are in need of newer, more effective treatments. SBP is discovering the underlying mechanisms of neurological disorders, and identifying new disease targets that will lead to innovative treatments to prevent, slow, or even reverse these complex conditions.

The broad list of diseases under investigation included Alzheimer’s and Parkinson’s disease, brain tumors, schizophrenia, depression, multiple sclerosis, as well as neurocognitive disorders caused by infection and inflammation. Many faculty presented data describing the basic biological processes that have gone awry and contribute to dysfunction, revealing “druggable” targets in the brain that may be modulated to improve the health of patients.

A special session on the technology and platforms available for research covered homing mechanisms that enhance the delivery of drugs to the brain, the application of stem cells to discover drugs, using stem cells to potentially restore damaged cells and tissue, and new lab tools to create small-molecules that can penetrate the blood-brain barrier to treat central nervous system disorders.

As SBP moves into 2016, we have a clear picture of the challenges and opportunities to advance our research to create new, better treatments to improve the lives of individuals and their families affected by neurological disorders.

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Using “Big Data” to combat the flu

Authorsgammon
Date

December 9, 2015

SBP has helped lead an international team of academic and pharmaceutical scientists that have tapped into publically available large-scale ‘Omics’ databases to identify new targets to treat influenza — the virus that causes annual epidemics and occasional pandemics. The study, published in Cell Host and Microbe, reflects a breakthrough approach using advanced computational designs to identify new factors that can be targeted to prevent viruses from spreading. The research team also created a website with open access for scientists to cull additional host-targets to develop the next-generation of anti-influenza drugs. Continue reading “Using “Big Data” to combat the flu”

Institute News

A sugar found in seaweed may help treat skin cancer

Authorsgammon
Date

December 8, 2015

New research from scientists at Sanford Burnham Prebys Medical Discovery Institute (SBP) suggests that a rare sugar found in seaweed, mushrooms, seeds and other foods may be able to help treat skin cancer. The sugar, called L-fucose, has previously been linked to a number of pathological conditions including inflammation and certain cancers. The current study, published in Science Signaling, is the first to associate L-fucose with melanoma, the most dangerous form of skin cancer.

“Our findings offer new, unprecedented detail into the sugar’s role in cancer,” said Ze’ev Ronai, PhD, senior author and scientific director of SBP’s La Jolla campus. “We found that by tampering with L-fucose metabolism, we could inhibit melanoma tumor metastasis. Not only were the tumors affected but also their microenvironment—the cells surrounding the tumor that play a critical role in sustaining the cancer—making the discovery even more impactful.”

Sugars, such as glucose and sucrose, come from many different sources and are used by the body in unique ways. Some sugars, including L-fucose, provide crucial tags on cell-surface proteins that signal inflammation and help direct cell migration. Previous research has shown that changes in the amount of L-fucose on cells are associated with breast and stomach cancers.

The study started with a broader investigation of activating transcription factor 2 (ATF2), a protein that controls the expression of many other proteins and that has been implicated in the development of melanoma and other cancers. Ronai’s group has been studying ATF2 for more than 20 years.

“To our surprise, one of the genes found to be regulated by ATF2 was fucokinase (FUK), which controls the ability of cells to process the dietary sugar, L-fucose, into a form that is useable for the modification (fucosylation) of proteins, many of which are on the cell surface, said Ronai.”

“In human samples, we found reduced fucosylation in metastatic melanomas and a better prognosis for primary melanomas with increased fucosylation. We suspect that the absence of L-fucose on melanoma cells makes them less sticky and more mobile in the body, making them more likely to metastasize,” Ronai explained.

Importantly, in mice with melanoma, the researchers were able to increase fucosylation either by adding the sugar to their drinking water or by genetic manipulation. Both methods inhibited the growth and metastasis of the tumors.

“Many patients develop resistance to current melanoma drugs. If we can add something like L-fucose to enhance these therapies, that’s very exciting, and it’s something we’re actively looking into,” said lead author Eric Lau, PhD, who is extending studies on the role of L-fucose in melanoma at the H. Lee Moffitt Cancer Center in Tampa, Florida,

“The dietary result was especially gratifying, because it suggests that modifying fucosylation could be achieved by the simple addition of L-fucose to drinking water.

“Our results further suggest that the addition of dietary sugar may help fight melanoma by boosting numbers of helpful immune cells. We are continuing our exploration of how fucosylation and other sugar coatings affect the immune system and impact cancer,” added Ronai.

To read the paper click here

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Existing compound holds promise for reducing Huntington’s disease progression

Authorsgammon
Date

December 7, 2015

Currently, there is no treatment to halt the progression of Huntington’s disease (HD), a fatal genetic disorder that slowly robs sufferers of their physical and mental abilities. In a new collaboration between SBP’s Conrad Prebys Center for Chemical Genomics (Prebys Center) and the University of California, San Diego School of Medicine, researchers have discovered that an existing compound, previously tested in humans for diabetes, offers hope for slowing HD and its symptoms. Continue reading “Existing compound holds promise for reducing Huntington’s disease progression”

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5 things you need to know about Thanksgiving and your metabolism

Authorsgammon
Date

November 25, 2015

Thanksgiving Day is fast approaching. While you may want to celebrate with your friends and family, you should think twice before you stuff yourself like a turkey. Overeating has been linked with metabolic disorders including diabetes, obesity, and heart disease.

Read further to learn about some of the effects of overeating, and the research at SBP aimed to find new ways to treat metabolic disorders.

  1. Although people think the average weight gain over the holidays is five pounds, it’s in fact only one pound. But most people don’t lose that pound after the holidays, and that probably contributes to our increasing body weight as we age.
  2. For patients with type 2 diabetes, eating during the winter holidays can lead to a substantial increase in your average blood sugar. The effects might not be reversed in the summer and autumn months, so be mindful of your food intake.
  3. Research has shown a link between a brain hormone called glucagon like peptide-1 (GLP-1), and overeating. GLP-1 is supposed to let our brains know when we are full. Deficiencies in the hormone may the cause us to consume more food than we need.
  4. The risk of a heart attack jumps four times in the two hours after a large meal. Eating in excess causes the stomach and intestines to work harder, challenging the heart.
  5. According to the Calorie Control Council, the average American may consume more than 4,500 calories during a traditional Thanksgiving dinner. Although the rule of thumb is that there are 3,500 calories in a pound, new research suggests you have to burn 7,000 calories for each pound of fat you want to get rid of.

To learn more about what SBP is doing to treat metabolic conditions, see these stories.

 

Can your heart prevent diabetes?

Anti-oxidant rich diet could stave off type 2 diabetes

Potential drug targets could improve treatment of vascular disease in diabetic patients

The hungry heart

Exercise following bariatric surgery provides health benefits

Ketogenesis prevents fatty liver disease

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Scientists identify promising new melanoma drug

Authorsgammon
Date

November 25, 2015

A new drug discovered by scientists at Sanford Burnham Prebys Medical Discovery Institute (SBP) may show promise for treating skin cancers that are resistant or unresponsive to today’s leading therapies.

In the United States, 5 million people are treated annually for skin cancer, and 9,000 people die from the deadliest form—melanoma—according to the US Department of Health and Human Services.

The new compound, named SBI-756, targets a specific molecular machine known as the translation initiation complex. These structures are in every cell and play the critical role of translating mRNA into proteins. In cancer cells the complex is impaired, producing extra protein and providing a growth advantage to tumors. SBI-756 causes the translation complex to dissociate, and was shown to inhibit melanoma cell growth in the study, published today in Cancer Research.

“The unique target of SBI-756 makes it especially promising for use in combination therapy,” said Ze’ev Ronai, senior author and scientific director of SBP’s La Jolla campus. “A major issue limiting the effectiveness of current melanoma therapies is that tumors become resistant to treatment. Combining drugs that come at a melanoma from different angles may help overcome the problem of drug resistance.”

About 50% of melanomas are caused by mutations in a specific gene called BRAF. Patients with these tumors are commonly prescribed vemurafenib, a BRAF inhibitor that shrinks tumors. However, many patients experience a relapse within weeks, months, or even years because tumors evolve and become resistant to the drug. A similar phenomenon is seen in mice, where treatment of BRAF melanomas results in an initial response, but 3-4 weeks later the tumors return.

The team found that if SBI-756 is co-administered with vemurafenib, the tumors disappeared and most importantly, they did not reoccur. Even in mice with advanced/late stage BRAF driven cancer, the reappearance of . These data suggests that SBI-756 provides a significant advantage in overcoming tumor resistance.

“The ability of this compound to delay or eliminate the formation of resistant melanomas is very exciting,” said Ronai.

In other forms of melanoma, caused by mutations in the genes NRAS and NF1—which are known as unresponsive to BRAF drugs—administering SBI-756 alone significantly the scientists found. The team is now testing whether combining SBI-756 with existing drugs used for treating these types of melanomas can make the tumors disappear.

Drugs that target the translation initiation complex have been intensely pursued in the past few years, not just for melanoma, but for a wide array of cancers. SBI-756 is considered a first-in-class drug because it is the first successful attempt to target a specific part of the complex called eIF4G1.

In fact, SBI-756 is the culmination of seven years of work in Ronai’s group—testing and tweaking the drug’s features to help it bind to the target more readily and to make it easier to formulate. The resulting compound is a significant improvement over the initial version.

“It appears that the dose we need to administer is very low. Even in the experiments where the drug was administered to mice with tumors over a significant period of time, we have not found any toxicity,” Ronai said.

“The finding of SBI-756 is also exciting for the possible treatment of diseases other than cancer, such as neurodegenerative diseases, where the activity of the translation initiation complex is reported to be higher,” said professor Nahum Sonenberg of McGill University, a world renowned leader in the field of protein translation.

“We hope that we’re going to come up with the next generation of the compound that can go into clinical trials—first in melanoma but likely in other tumors,” Ronai said.

The study was performed in collaboration with the Conrad Prebys Center for Chemical Genomics at SBP, Lady Davis Institute for Medical Research, Sir Mortimer B. Davis-Jewish General Hospital, McGill University (Canada), the National Cancer Institute, MD Anderson Cancer Center, and Yale University.

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SBP’s 37th Annual Symposium: Aging and Regeneration

Authorsgammon
Date

November 3, 2015

On Friday, October 30, more 350 people came to SBP’s 37th Annual Symposium to hear leading scientists present their latest research on aging and regeneration.  The presenters, listed here, provided valuable insight into the latest studies on what causes aging, and strategies to repair injuries, prolong life, and prevent diseases.  The event was hosted by (from left to right): Rolf Bodmer, PhD, Malene Hansen, PhD, (in bee costume for Halloween) Alexey Terskikh, PhD

 

organizers-symposium-beaker

Many congratulations to Esther Minotti for successfully organizing the event!

symposium-photo-beaker

And many thanks to the Glenn Foundation for Medical Research for their support.