antibodies Archives - Sanford Burnham Prebys
Institute News

Scientists uncover protein that empowers antibodies

AuthorMonica May
Date

January 11, 2021

Discovery may lead to better vaccine strategies and improve treatments for cancer and autoimmune disorders

Antibodies are the heroes of our immune system. They protect us from viruses, like SARS-CoV-2 (which can lead to COVID-19), as well as bacteria and other pathogens. They can provide lifelong protection from future infections—if they are strong enough. But, like any hero, they are fallible, and certain cancers or autoimmune disorders can arise when things go wrong.

Now, Sanford Burnham Prebys scientists have revealed that a protein called cyclin D3 tells antibody-producing B cells to start dividing—opening new research avenues that could improve vaccine development or the treatment of B cell lymphoma and autoimmune disorders. The discovery was published in Cell Reports.

Antibodies get their power from a complicated process. When an “intruder” is detected in the body, B cells—which produce antibodies—are activated. Each B cell is unique—they contain slight genetic variations to produce a diverse set of antibodies to attack the “intruder.” Later, they undergo optimization through a “survival of the fittest” process to identify the most protective versions.

“Our findings reveal that cyclin D3 is the ‘go’ signal for B cells to start rapidly dividing and producing a set of diverse antibodies,” says Parham Ramezani-Rad, PhD, a postdoctoral researcher in the Tumor Microenvironment and Cancer Immunology Program at Sanford Burnham Prebys and the lead author of the study. “This information might help scientists create better vaccine strategies in the future. On the flip side, researchers may be able to develop better weapons against B cell lymphoma and autoimmune disorders by removing malignant B cells.”

Parham Ramezani-Rad, PhD

​Parham Ramezani-Rad, a postdoctoral researcher at Sanford Burnham Prebys and lead author of the study.

Diving into the “dark zone”

After infection, B cells grow and divide in special structures called germinal centers that form in our spleen and lymph nodes. In this structure, a “dark zone”—referring to what scientists saw under the microscope in the 1930s—and a “light zone” are visible. Now researchers know the dark zone is where B cells are rapidly expanding, and this cell density appeared darker in the original microscope studies. After proliferating in the dark zone, B cells head to the light zone where the best potential antibody options are selected—while less desirable options are eliminated.

Cell Reports cover

Parham Ramezani-Rad designed the image that was featured on the cover of Cell Reports. The image is an artistic impression of the dynamics occurring inside of the germinal center, where antibody-producing B cells undergo a “survival of the fittest” selection process.

​Ramezani-Rad made the discovery when studying B cell lymphoma, a blood cancer that often contains a mutation that leads to hyper-stable cyclin D3. Using mice and sophisticated CRISPR gene editing technology, he discovered that cyclin D3 regulates the expansion or contraction of B cells specifically in the dark zone of germinal centers—and not the light zone. He also identified other regulatory aspects involved in this process that scientists might be able to harness for the benefit of human health.

“B cell lymphoma is often treated with an intensive chemo and immunotherapy combination. The side effects of this treatment can be immense, and relapses may occur,” says Ramezani-Rad. “Our findings about cyclin D3 could form the basis for a more tailored medicine that targets exactly what goes wrong during B cell lymphoma, and is potentially less toxic and more effective.”

Ramezani-Rad also designed the image that was selected for the journal cover, which is his artistic impression of the dynamics occurring inside the germinal center. He finds many parallels between scientists and artists.

“As a scientist, I see myself describing what already exists in nature,” explains Ramezani-Rad. “Musicians and painters are also describing the world. They are just using instruments or paint strokes to express emotions, whereas scientists use data to express knowledge.”

Institute News

Ebola expert weighs in on news of a potential cure

AuthorMonica May
Date

August 13, 2019

Scientists recently reported that two treatments saved the lives of people infected with the Ebola virus—with the New York Times reporting that roughly 90% of newly infected patients were saved—suggesting we are ever so close to a cure. 

To place this news in context, we caught up with Ebola expert Sumit Chanda, PhD, whose team at Sanford Burnham Prebys is working to find a pill-based treatment for the deadly virus.

Tell us a bit more about Ebola and the recent outbreaks. 
Ebola is a virus responsible for severe, often fatal, hemorrhagic fevers in humans—meaning it damages blood vessels and can cause internal bleeding, among other symptoms. The mortality rate varies between 50% and 90%. The 2014 to 2016 West Africa epidemic has been of unprecedented scope, with more than 28,000 reported cases and more than 11,000 deaths. Exported cases were also documented in the U.S. and Europe. Since August 2018, a new outbreak is ongoing in the Democratic Republic of the Congo, with more than 2,800 total cases reported and more than 1,800 deaths. So far, no medication can treat people already sickened by Ebola (an experimental vaccine has shown effectiveness).

Describe the study and key findings for us. 
Last November, several potential treatments were evaluated in clinical trials in the outbreak area. Two of these treatments, mAb114 (Ridgeback Biotherapeutics) and REGN-EB3 (Regeneron Pharmaceuticals), were found to be highly effective in reducing Ebola-related deaths. These drugs are monoclonal antibodies, which are protein-based therapies—the same kind that are currently being used to treat cancers, autoimmune and other diseases. 

What is your reaction? Is this big news? Or is more research needed?
This is a very important result. For the first time, a clinical therapy significantly reduced mortality after Ebola exposure—especially when given early after infection. While it cannot be called a “cure,” since not everyone taking the therapy survived, it represents a hugely important advance by the scientific community and brings hope to people exposed to this virus and in the outbreak regions. 

What does this advance mean for people infected with the Ebola virus?
People impacted by Ebola have so far been skeptical about medical treatment, especially considering the low success rate of previous treatments. We expect that the high survival rate associated with these two treatments will encourage infected individuals to go to Ebola treatment centers. This will increase the number of people receiving the treatments, reducing the total amount of deaths and helping contain the spread of the virus.

What does this news mean for the quest to find an Ebola treatment?
This remarkable achievement gives me hope that a cure is possible, potentially by combining these therapies with additional drugs. There is more work to be done, however. These antibody-based treatments require administration by a medical professional in a specialized Ebola treatment center and can be expensive. An Ebola therapy that comes in the form of a low-cost pill—the focus of my lab’s work—will be easier to deploy to patients, especially in areas that do not have access to advanced facilities. Since it appears that early treatment is important, easy availability to a medicine will benefit rural patients who are usually at the epicenter of an outbreak—and will help prevent an epidemic from taking root in the first place. 

Anything else you’d like to add? 
We are now, more than ever, hugely optimistic that efforts to develop an Ebola antiviral drug, especially one that is low cost and can be easily distributed in affected regions, will be part of a complete cure regimen for Ebola.

Sumit Chanda, PhD, is the professor and director of the Immunity and Pathogenesis Program at Sanford Burnham Prebys. His team works to find new treatments for infectious diseases, including influenza A (flu), human immunodeficiency virus (HIV) and Ebola virus, by unraveling the cellular machinery that allows these viruses to thrive.