Conrad Prebys Center for Chemical Genomics Archives - Page 2 of 3 - Sanford Burnham Prebys
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SBP and friends remember Conrad Prebys with a touching tribute

AuthorHelen I. Hwang
Date

October 11, 2017

With the brilliant sun descending over the famed Torrey Pines Golf Course overlooking the Pacific Ocean, a close knit of friends and loved ones gathered to pay tribute to Conrad Prebys and his lasting impact on Sanford Burnham Prebys Medical Discovery Institute (SBP). It might’ve been the same kind of gorgeous sunset that inspired Prebys to put down roots in California after moving from Indiana with $500 in his pocket.

T. Denny Sanford and Malin Burnham came to the podium and spoke about the loss of their dear friend Conrad. Burnham spoke about how much he admired Conrad’s “gut” feeling, which inspired him to become a loyal supporter to the Institute. In 2015, SBP was the recipient of Prebys’ extraordinary philanthropic gift of $100 million.

SBP President Kristiina Vuori, MD, PhD, recounted Conrad’s delightful visits and his longstanding relationship with the Institute. Michael Jackson, PhD, senior vice president of Drug Discovery and Development and head of the Conrad Prebys Center for Chemical Genomics, known as the Prebys Center, spoke highly about how impressed he was with Conrad’s intellectual curiosity and passion for science.

“Conrad’s generosity has enabled us to become a world-class facility, with the Prebys Center being recognized as one of the most comprehensive, nonprofit drug discovery centers in the world, conducting innovative drug discovery across all major disease areas – cancer, Alzheimer’s, Parkinson’s disease, heart failure, diabetes, autoimmune diseases, such as rheumatoid arthritis and Crohn’s disease,” said Dr. Jackson. In large part because of Conrad’s pivotal contribution, SBP is often chosen as a collaborative partner of choice among pharmaceutical companies, biotech companies, academic institutions and academic foundations all over the United States.

Debbie Turner also attended the tribute and enjoyed the walk down memory lane with Conrad and his relationship to SBP with a photo presentation of years past and a dedicated short video SBP produced celebrating Conrad’s life.

Guests enjoyed an outdoor buffet reception, while mingling with scientists who attended SBP’s Annual Symposium earlier that day. Nearly 300 scientists from all over the world gathered to attend SBP’s annual conference, which was themed “Frontiers in Single Cell Biology.”

After the touching tribute that brought a few of the guests to tears, friends gathered for a light reception of dessert and coffee and said their “goodbyes” until the next SBP event.

Our Annual Gala will be held on Saturday, October 14 at Coasterra on Harbor Island in downtown San Diego. Tickets are available here: SBP’s 2017 Annual Gala.  

 

Joan and Irwin Jacobs with Denny Sanford
Irwin and Joan Jacobs with Denny Sanford

 

Sheila and Jeffrey Lipinski with Debbie Turner
Sheila and Jeffrey Lipinsky with Debbie Turner

 

 

 

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Nanowire arrays allow electrical recording of neuronal networks

AuthorJessica Moore
Date

April 12, 2017

To examine a neuron’s health, activity and response to drugs, scientists record its electrical activity. Current methods of recording are destructive, so they can only be used to study a neuron for a brief period, and can only measure the activity of one cell at a time. But neurons don’t function individually—they act in networks, and commonly used systems for detecting the electrical activity of complex groups of neurons aren’t as sensitive as they could be.

A new technology developed through a collaboration between Anne Bang, PhD, director of Cell Biology in the Conrad Prebys Center for Chemical Genomics at the Sanford Burnham Medical Research Institute, and Shadi Dayeh, PhD, associate professor at UC San Diego, makes high-sensitivity recording possible in neuronal networks. Publishing in Nano Letters, the team describes nanowire arrays that could accelerate drug development for neurological and neuropsychiatric diseases.

“We envision that this nanowire technology could be used on stem-cell-derived brain models to identify the most effective drugs for disorders like bipolar disorder and Alzheimer’s,” says Bang.

The nanowire technology developed in Dayeh’s laboratory is nondestructive and can simultaneously measure potential changes in multiple neurons — with the high sensitivity and resolution achieved by the current state of the art.

The device consists of an array of silicon nanowires densely packed on a small chip patterned with nickel electrode leads that are coated with silica. The nanowires poke inside cells without damaging them and are sensitive enough to measure small potential changes that are a fraction of or a few millivolts in magnitude. Neurons interfaced with the nanowire array survived and continued functioning for at least six weeks.

Another innovative feature of this technology is it can isolate the electrical signal measured by each individual nanowire. “This is different from existing nanowire technologies, where several wires are electrically shorted together and you cannot differentiate the signal from every single wire,” Dayeh says.

Dayeh noted that the technology needs further optimization for brain-on-chip drug screening. His team is working to adapt the arrays for heart-on-chip drug screening for cardiac diseases and in vivo brain mapping, which is still several years away. “Our ultimate goal is to translate this technology to a device that can be implanted in the brain.”

This story is based on a press release from UC San Diego.

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Consortium awarded $15 million to unravel bipolar disorder and schizophrenia

AuthorSusan Gammon
Date

August 31, 2016

Sanford Burnham Prebys Medical Discovery Institute (SBP), the Johns Hopkins University School of Medicine, the Salk Institute for Biological Studies, and the University of Michigan will embark on a $15.4 million effort to develop new systems for quickly screening libraries of drugs for potential effectiveness against schizophrenia and bipolar disorder, the National Institute of Mental Health (NIMH) has announced. The consortium, which includes two industry partners, will be led by Hongjun Song, PhD, of Johns Hopkins and Rusty Gage, PhD, of Salk.

Bipolar disorder affects more than 5 million Americans, and treatments often help only the depressive swings or the opposing manic swings, not both. And though schizophrenia is a devastating disease that affects about 3 million Americans and many more worldwide, scientists still know very little about its underlying causes — which cells in the brain are affected and how — and existing treatments target symptoms only.

With the recent advance of induced pluripotent stem cell (iPSC) technology, researchers are able to use donated cells, such as skin cells, from a patient and convert them into any other cell type, such as neurons. Generating human neurons in a dish that are genetically similar to patients offers researchers a potent tool for studying these diseases and developing much-needed new therapies.

“IPSCs are a powerful platform for studying the underlying mechanisms of disease,” says Gage, a professor of genetics at Salk. “Collaborations that bring together academic and industry partners, such as this one enabled by NIMH, will greatly facilitate the improvement of iPSC approaches for high-throughput diagnostic and drug discovery.”

A major aim of this collaboration is to improve the quality of iPSC technology, which has been limited in the past by a lack of standards in the field and inconsistent practices among different laboratories. “There has been a bottleneck in stem cell research,” says Gage, a professor of genetics at Salk. “Every lab uses different protocols and cells from different patients, so it’s really hard to compare results. This collaboration gathers the resources needed to create robust, reproducible tests that can be used to develop new drugs for mental health disorders.”

The teams will use iPSCs generated from more than 50 patients with schizophrenia or bipolar disorder so that a wide range of genetic differences is taken into account. By coaxing iPSCs to become four different types of brain cells, the teams will be able to see which types are most affected by specific genetic differences and when those effects may occur during development.

First the researchers must figure out, at the cellular level, what features characterize a given illness in a given brain cell type. To do that, they will assess the cells’ shapes, connections, energy use, division and other properties. They will then develop a way of measuring those characteristics that works on a large scale, such as recording the activity of cells under hundreds of different conditions simultaneously.

“SBP’s Conrad Prebys Center for Chemical Genomics will play a key role in this initiative,” says Anne Bang, PhD, a director at the Center. “We will be developing assays and testing prototype drug compounds to see if they induce the desired response in iPSC disease models from the consortium. Our goal is to establish assays suitable for high throughput drug screening, ultimately leading to discovery of drugs for preclinical and clinical studies.”

Once a reliable, scalable and reproducible test system has been developed, the industry partners will have the opportunity to use it to identify or develop drugs that might combat mental illness. “This exciting new research has great potential to expedite drug discovery by using human cells from individuals who suffer from these devastating illnesses. Starting with a deeper understanding of each disorder should enable the biopharmaceutical industry to design drug discovery strategies that are focused on molecular pathology,” says Husseini K. Manji, MD, F.R.C.P.C., global therapeutic area head of neuroscience for Janssen Research & Development.

The researchers also expect to develop a large body of data that will shed light on the molecular and genetic differences between bipolar disorder and schizophrenia. And, since other mental health disorders share some of the genetic variations found in schizophrenia and bipolar disorder, the data will likely inform the study of many illnesses.

The National Cooperative Reprogrammed Cell Research Groups program, which is funding the research, was introduced by the National Institute of Mental Health in 2013 to overcome barriers to collaboration by creating precompetitive agreements that harness the unique strengths of academic and industry research.

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Existing compound holds promise for reducing Huntington’s disease progression

Authorsgammon
Date

December 7, 2015

Currently, there is no treatment to halt the progression of Huntington’s disease (HD), a fatal genetic disorder that slowly robs sufferers of their physical and mental abilities. In a new collaboration between SBP’s Conrad Prebys Center for Chemical Genomics (Prebys Center) and the University of California, San Diego School of Medicine, researchers have discovered that an existing compound, previously tested in humans for diabetes, offers hope for slowing HD and its symptoms. Continue reading “Existing compound holds promise for reducing Huntington’s disease progression”

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SBP Collaborates with NIH’s Translational Science Center on pancreatic cancer

Authorsgammon
Date

October 13, 2015

The National Center for Advancing Translational Sciences (NCATS) has initiated a novel collaborative study with Pamela Itkin-Ansari, PhD., to screen for drugs that reprogram pancreatic cancer cells back to a normal, non-threatening phenotype.

The collaboration is based on Itkin-Ansari’s research and development of a screening platform to find drugs that induce the overexpression of E47, a protein that binds to specific DNA sequences, causing cells to differentiate to acinar cells—cells with normal pancreatic cell traits and characteristics.

“I’m delighted to be working with NCATS on a project that may lead to better treatments for pancreatic cancer patients,” said Itkin-Ansari, adjunct professor in the Development, Aging, and Regeneration Program at SBP. “The Center will be screening novel compounds as well as approved drugs that can be repurposed, potentially accelerating the clinical development process due to their known safety profiles and characterized mechanisms.”

The outlook for patients with pancreatic cancer is very poor. Among people diagnosed with the disease, 80 percent are dead within the first year, and 90 percent the year after that. And pancreatic cancer is one of the few cancers for which survival has not improved substantially in 40 years.

One reason pancreatic cancer is so deadly is that there are no good detection tools to diagnose the disease in the early stages, so by the time most patients are diagnosed the cancer has spread to the liver or other areas of the body. Another reason is that there are really no good treatments—response to chemotherapy and radiation is poor.

NCATS was established by the National Institutes of Health (NIH) to transform the translational science process so that new therapies for disease can be delivered to patients faster. For drug discovery collaborations, the Center works with academic investigators that are biology and disease experts that have demonstrated a novel approach, a primary screening platform that they can adapt, and a follow-up critical path for the project.

Dr. Itkin-Ansari pointed out that technical guidance provided by the Conrad Prebys Center for Chemical Genomics at SBP was instrumental in validation of her screening platform. “Their experience in developing high throughput screening assays, such as the one that will be used in this collaboration, is unparalleled in the nonprofit research sector” said Itkin-Ansari.

“NCATS has a history of success in novel therapeutic approaches and I’m hopeful that our collaboration will result in identification of a proof-of-concept compound for advancing studies on reprogramming as an intervention for pancreatic cancer.”

The research will be funded by the Marian and Ralph Falk Medical Research Trust.

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The Mayor of San Diego visits SBP in La Jolla

Authorsbraun
Date

September 1, 2015

On Friday, August 28, the Mayor of San Diego, Kevin Faulconer, visited SBP to learn more about how our Institute is conducting world-class research dedicated to finding cures for human disease.

The Mayor was first welcomed by Perry Nisen, MD, PhD, CEO of SBP and Kristiina Vuori, MD, PhD, President of the Institute. Drs. Nisen and Vuori shared how SBP is evolving as a hybrid organization that blends cutting-edge fundamental research and robust drug discovery with a clear line of sight to the patient in a way that cannot be accomplished in academia, pharma, or biotech. Our goal is to combine our world-class research with clinical science to translate discoveries into important new diagnostic and therapeutic medical advances.

Mayor Faulconer continued his visit with a tour of the Conrad Prebys Center for Chemical Genomics, led by Michael Jackson, PhD, senior vice president, Drug Discovery and Development.  Since its opening, the Center has been shortening the distance between basic research findings and therapeutic discoveries. Dr. Jackson presented how the Center uses high-throughput robotic technology to systematically screen up to one million chemicals per day to find the few that are potential starting points for new medicines.

It was an honor to welcome the mayor and share our commitment to finding new ways of restoring health and hope to patients everywhere.

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Pathway that controls cancer cell proliferation discovered

Authorsgammon
Date

August 13, 2015

In a new study by SBP, researchers have identified a novel kinase cascade that regulates mTORC1, a protein complex implicated in the control of cancer cell growth in response to nutrients. The study, published in Cell Reports, provides further insight into the control of mTORC1 activation, and highlights several new potential drug targets to treat human pathologies linked to mTORC1 deregulation. Continue reading “Pathway that controls cancer cell proliferation discovered”

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SBP spin-out company micro-gRx receives $200,000 Space Florida award

Authorpbartosch
Date

July 20, 2015

We’re excited to announce that the first funded company established based on work emerging from our Lake Nona campus, micro-gRx Incorporated, has received a $200,000 award from Space Florida through the Florida – Israel Innovation Partnership Program. micro-gRx is partnering with R&D company SpacePharma to develop a “lab on a chip” research model that enables scientists to study live human cells in microgravity. Continue reading “SBP spin-out company micro-gRx receives $200,000 Space Florida award”

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New collaboration strives to find novel treatment approaches for cardiovascular disease

Authorpbartosch
Date

May 28, 2015

Sanford-Burnham today announced it has signed a two-year partnership agreement with Takeda Pharmaceutical Company Ltd. of Japan to study the potential role of several gene regulatory proteins as targets for the treatment of heart failure. Based on research conducted in Sanford-Burnham laboratories, the collaborating scientists will screen and develop molecules that have the potential to improve the metabolism and function of the failing heart. Continue reading “New collaboration strives to find novel treatment approaches for cardiovascular disease”

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LEAD San Diego visits Sanford-Burnham in La Jolla

Authorrbruni
Date

May 13, 2015

On Tuesday, May 5, Sanford-Burnham hosted LEAD San Diego, a local civic leadership organization that helps emerging and seasoned leaders in all sectors of the San Diego community expand their skills and enhance their knowledge of the local business enterprises, for a special breakfast and tour.

The visitors enjoyed a welcome by Institute CEO Dr. Perry Nisen before embarking on a tour of the state-of-the-art La Jolla, Calif., facilities.

Tour highlights included a stop at the Conrad Prebys Center for Chemical Genomics, where Dr. Anne Bang, Director, Cell Biology, gave a brief overview on  how the Institute utilizes cutting-edge technology to identify the precise small molecules that will become the building blocks of future medicines.

The visitors also had the opportunity to stop by the Center for Stem Cell Biology and Regeneration, where Dr. Yang Liu, a visiting researcher in the lab of Dr. Evan Synder, Professor, Human Genetics Program, gave them an overview of the Institute’s stem cell studies.

If you would like to arrange a visit to the Institute, please email Sandy Hanna at shanna@sanfordburnham.org or call (858)795-5056.

Dr. Yang Liu shares information on the Stem Cell Core with LEAD San Diego tour members.

Dr. Anne Bang with the LEAD San Diego group.LEAD San Diego Tour