Carl Ware Archives - Sanford Burnham Prebys
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How our immune system controls gut microbes

AuthorMiles Martin
Date

April 6, 2022

And how this relationship could help fight autoimmune diseases

Sanford Burnham Prebys researchers including Carl Ware, PhD, and John Šedý, PhD have discovered an immunological process in the gut that could help improve treatment for autoimmune and gastrointestinal diseases. The study, published March 22 in Cell Reports, found that this process regulates the activation of white blood cells in the intestines, which ultimately helps the body control the composition of the gut microbiome. 

“The immune system is like a gardener for our gut bacteria, gently monitoring and responding to their populations and keeping an eye out for unwanted pathogens” says Ware, who directs the Infectious and Inflammatory Diseases Center at Sanford Burnham Prebys. “This ultimately helps the immune system control these microbes.”

This “gardening” relies on a molecule called BTLA, one of several checkpoint proteins used by the body to control the immune system. 

“This is a signaling system we’ve known about for decades, but this is a totally new function for it that we’ve never seen before,” says Šedý, a Sanford Burnham Prebys research assistant professor, who co-led the study with Ware. “I helped discover this system two decades ago, so it’s exciting that we’re still making new discoveries about its function.”  

To explore the role of BTLA in the gut, the team zeroed in on specialized lymph nodes in the intestines called Peyer’s patches, which are full of white blood cells that help monitor and respond to pathogens and other microbes in the gut.

“Gut bacteria are in constant competition, and the populations of specific species can fluctuate,” says Ware. “In a healthy microbiome, there’s a balance, and disrupting that balance can contribute to autoimmune diseases, gastrointestinal disorders and even some brain disorders.”

The team found that BTLA is critical for maintaining this balance because it triggers white blood cells to release antibodies that control the populations of different gut bacteria.

“It’s a finely calibrated system that we’re still only just beginning to understand in detail,” adds Ware.

Immune checkpoints like BTLA are already used in immunotherapy for some cancers, and these results make the researchers confident that this system can be leveraged to treat diseases in the gut, especially those that are also autoimmune disorders, such as Crohn’s disease or ulcerative colitis. 

“The immune system is unimaginably complex, and understanding it gives us the ability to manipulate it, and that can help us treat diseases,” says Šedý. “This discovery is a step forward in that larger narrative.” 

Institute News

New COVID-19 drug passes phase 2 clinical trial

AuthorMiles Martin
Date

January 20, 2022

The new treatment, developed by Avalo Therapeutics with Sanford Burnham Prebys researchers, can mitigate lung damage and improve survival in COVID patients.

In a phase 2 clinical trial conducted by Avalo and supported by Sanford Burnham Prebys, a significantly higher proportion of hospitalized patients with COVID-19 remained alive and free of respiratory failure for 28 days after receiving treatment with the new antibody, called CERC-002. Unlike other experimental COVID therapies, CERC-002 does not target the virus itself, instead targeting the immune response associated with the virus to stop the disease from progressing before it becomes fatal.

“At the beginning of the pandemic we thought vaccines were going to be all we really needed. But with variants like omicron, we’re going to have more people that progress to serious illness even with the vaccine,” says study coauthor Carl F. Ware, PhD, director of the Infectious and Inflammatory Diseases Center at Sanford Burnham Prebys. “We need treatments to stop the progression to severe disease and death.”

The findings were published December 6 in the Journal of Clinical Investigation.
 

COVID-19: a continuing crisis
In the United States, over 840,000 people have died from COVID-19. A large proportion of these deaths have been among the elderly or those who are immunocompromised due to a preexisting condition. And while three quarters of the population has received at least one dose of the COVID-19 vaccine, many remain unvaccinated.

“A lot of us feel safer now that we’ve gotten our shots,” Ware says, “but the threat of the pandemic has not gone away, even for vaccinated people.”

Most people with COVID-19 experience few to no symptoms. However, elderly individuals, people with a concurrent health condition or those who are immunocompromised are susceptible to a condition called cytokine storm, in which their own immune molecules called cytokines flood the body in higher concentrations than usual.

Rather than helping fight the virus, these extra immune molecules wreak havoc, causing patients to develop the deadly respiratory failure characteristic of severe COVID disease.

“The COVID virus gets the immune system amped up by producing these molecules, which is normally how the immune system fights diseases,” says Ware. “But when there are too many cytokines and they’re not doing their job, it can lead to severe damage.”
 

Neutralizing the cytokine storm
The new treatment, CERC-002, is a cytokine neutralizer—an immune molecule that recognizes and deactivates a cytokine known as LIGHT, which is elevated in patients with COVID-19. Cytokine neutralization drugs are currently being tested in the clinic, but they are mainly effective in severely ill patients who are already on a ventilator or other organ support.

“There is a critical need for drugs to stop milder cases from progressing to severe,” says Ware. “This treatment targets the cytokine immune response early enough to stop it in its tracks, which no other treatment does right now.”

83 COVID patients were enrolled in the study, half receiving the treatment, and half receiving a placebo. All patients were hospitalized with mild-to-moderate respiratory distress and were also receiving standard-of-care therapy during the trial.

They found that 83.9% of patients who received a dose of CERC-002 on top of standard of care remained alive and free from respiratory distress for 28 days. For patients receiving placebo, the number was only 64.5%.
 

Looking ahead
As a phase 2 clinical trial, the purpose of this study was to test whether the compound has therapeutic potential in a small number of patients. Now that the drug has proven successful at a small scale, it can be tested on a larger number of patients to ensure its benefits are consistent across the population.

Additionally, because CEC-002 targets the immune response in COVID cases rather than the virus itself, the compound may have applications that extend beyond COVID.

“Cytokine storm is not unique to COVID. It occurs in other infections—even in autoimmune diseases with no active infection, so this treatment may have some utility in these other diseases as well.” 
While there is more work to be done before CERC-002 becomes widely available, it does offer a glimmer of hope during a pandemic that seems never-ending.

“We have made a lot of progress in controlling the pandemic with vaccines and other new therapies, but it’s not over yet,” says Ware. “Treatments like this may bring physicians an option to protect infected people from severe illness.

Institute News

Symposium brings leaders in tumor immunology to SBP

Authorjmoore
Date

March 21, 2016

SBP’s La Jolla campus recently hosted a one-day conference on Cancer Immunology and the Tumor Microenvironment, one of the hottest topics in cancer research. The symposium on March 17 attracted approximately 160 attendees from across the La Jolla biomedical research mesa.

The symposium was organized by Carl Ware, PhD and Robert Rickert, PhD, directors of the Inflammatory and Infectious Disease Center and the Tumor Microenvironment and Cancer Immunology Program, respectively. They planned a scientific agenda that covered diverse aspects of research on harnessing the immune system to treat cancer, from improving current immunotherapies to identifying new immunological targets. Talks were given by prestigious scientists including:

Two SBP researchers also presented. Linda Bradley, PhD, professor in the Immunity and Pathogenesis Program, discussed her work on the immune cell surface protein PSGL-1, showing that it regulates PD-1, a so-called “immune checkpoint.” PD-1 is found on T cells and normally acts as on “off switch” to keep the immune system from attacking cells in the body. PD-1 regulators are a new approach to treating cancer that work by unleashing cytotoxic T cells to kill cancer cells.

 

Adam Godzik, PhD, professor and director of the Bioinformatics and Structural Biology Program, spoke about using bioinformatic analyses to search for new cancer drivers related to the immune response. Cancer drivers are genes that, when altered, are responsible for cancer progression. Combining cancer mutation and protein structure databases, his team has identified many genes involved in immune recognition of tumors.

Institute News

You’re invited to a psoriasis research update and reception

Authormigartua
Date

December 15, 2015

Come join us at Sanford Burnham Prebys Medical Discovery Institute (SBP) to learn about the latest research in psoriasis and psoriatic arthritis taking place in your community. The Psoriasis Research Update and Reception is jointly sponsored by SBP and the National Psoriasis Foundation. The event will take place on:

Tuesday, February 2, 2016 6:00 – 8:00 p.m. Sanford Burnham Prebys Medical Discovery Institute Building 12 Auditorium 10905 Road to the Cure San Diego, CA 92121

Take a tour of the SBP Psoriasis Research Lab and come to the reception where we will provide hors d’oeuvres and beverages.

 

Our guest speakers will include:

  • Carl Ware, PhD, Director of SBP’s Infectious and Inflammatory Diseases Center
  • John Sedy, PhD, Research Assistant Professor
  • Randy Beranek, President and CEO of the National Psoriasis Foundation
  • Erik Gilbertson, MD, Division Head of Dermatology at Scripps Clinic

RSVP to hbuthmann@sbpdiscovery.org by January 29, 2015 to reserve your spot.

 

We look forward to seeing you there!

Institute News

Will your autoimmune disease be cured?

Authorsgammon
Date

August 25, 2015

More than 23 million Americans have an autoimmune disease. And although there are more than 80 different types of autoimmune diseases, they all have three things in common:

  1. The immune system is attacking healthy cells
  2. The cause of the disease is unknown
  3. There is no cure

No cure. No cure. No cure. That’s not good news. Given that I have a 1 in 12 chance of getting an autoimmune disease in my lifetime (if you are a man your chance is 1 in 20), and those chances increase with every birthday (and mine is next month), I asked SBP experts in immunology what makes them hopeful that we are on the road to better treatments for these chronic, debilitating, and sometimes deadly diseases. Below are their forward-looking answers.

 

Continue reading “Will your autoimmune disease be cured?”

Institute News

SBP surfers rule!

Authorsbraun
Date

August 21, 2015

Did you know that SBP has a surfing team?  Not only do we have a team, but we have a winning team!  Last weekend, Carl Ware, full-time immunologist and part-time surfer, led the SBP team to victory in the Luau and Legends of Surfing Invitational, a contest held in San Diego that raises funds for the UC San Diego Moores Cancer Center.

Surf contest 4

For the past 22 years the Luau has attracted some of the most respected men and women in surfing history, along with business leaders, scientists, local politicians and national celebrities, all surfing for a cure. The event has raised more than $7 million for cancer research, improved public awareness of the need for better therapies, and always creates unlimited fun for participants and spectators.

“The Luau and Legends Invitational hits both of my passions, science and surfing.  I’ve been surfing in the event for about 10 years,” said Ware. “Raising money for cancer research is great, but I especially treasure surfing with my son and teammates.”

Surf contest 3

Each competitive team consists of four members and a surf legend. This year the SBP team included Carl Ware, his son Austin, Jeff Timpson, Loni Christiansen, and surf legend Tom Ortner. Austin lives in Australia and is a sports psychologist and surf coach.  Jeff, who does a remarkable head stand on his board, and Loni, who surfs a stylish switch foot, are local sufers that frequent Swami’s break.  Ortner is a living legend from La Jolla who surfed professionally in the 1970’s.

The SBP team raised an impressive $15,000 for the Cancer Center.

SBPSurfTeam2015JeffDevine

Other notable surf stars that participated in the event were Robert August and Mike Hynson. Stars of the classic surf film Endless Summer, Pat O’Connell, Robert “Wingnut” Weaver, and Rob Machado and many others.

“We won for cancer research, and now we are planning a world tour to help defeat cancer,” added Ware.

IMG_9487

Carl Ware, PhD, is the director of SBP’s Infectious and Inflammatory Disease Center.

Institute News

Researchers find new method to halt the advance of liver cancer

Authorsgammon
Date

July 24, 2015

A new study by researchers at SBP, the National Cancer Institute, and the Chulabhorn Research Institute has found that blocking the activity of a key immune receptor, the lymphotoxin-beta receptor (LTβR), reduces the progression of liver cancer. The results, published recently in the online edition of Gut, could provide new treatment strategies for the disease, which is the third leading cause of cancer-related deaths worldwide. Continue reading “Researchers find new method to halt the advance of liver cancer”