Our students, graduates and faculty

sbp students and faculty

Our community

Our highly individualized education is designed to focus on your scientific interests and career goals.

At the heart of the program is mentorship by outstanding faculty. Unique aspects of the Sanford Burnham Prebys Ph.D. program include:

  • Highly personalized curriculum with 1:1 tutorials
  • Career advising and support in research training
  • Immigration support
  • Training also offered in:
     •  Writing and presentation skills
     •  Leadership development
     •  Career and professional development
Educating Ph.D. students to become the innovative biomedical scientists of the future.

Current graduate students

Katja Birker, B.S.

Katja’s work focuses on elucidating the molecular, cellular, and morphological processes of candidate congenital heart disease genes in the Drosophila heart.

Ryan Loughran, B.S.

Ryan is working to uncover new and important roles of phosphoinositide lipid kinase signaling in the context of tumor cell metabolism.

Karina Barbosa Guerra, B.S.

Karina’s research focuses on understanding the dysregulation of epigenetic mechanisms in hematological malignancies to improve therapeutic interventions.

  • Michael Alcaraz, B.S.
    Michael’s work will focus in understanding the epigenetic changes that occur in humans as we age and how these changes lead to a higher cancer incidence.
  • Aleksandr Arzamasov
    Alex studies the key bacterial taxa involved in healthy development of the neonatal human gut microbiota using bioinformatic and biochemical approaches.
  • Karina Barbosa Guerra, B.S.
    Karina’s research focuses on understanding the dysregulation of epigenetic mechanisms in hematological malignancies to improve therapeutic interventions.
  • Nicole Bata, B.S.
    Nicole’s work focuses on exploring STK3/STK4 kinases as modulators of autophagy in cancer.
  • Meher Beigi Masihi, M.S.
    Meher’s work is focused on understanding underlying molecular mechanisms of pediatric brain tumor development to identify potential therapeutic targets.
  • Betsaida Bibo Verdugo, M.S.
    Betsaida focuses on elucidating cell death mechanisms triggered by cancer treatment interventions. She is interested in potentiating inflammatory cell death mechanisms on cancer cells, such as necroptosis and pyroptosis, as a path to improve therapeutic outcomes.
  • Yu-Ling (Linda) Chang
    Linda’s research focuses on identifying novel barriers to cell reprograming to regenerate cardiomyocytes and investigating the mechanism of barriers in cell fate determination and reprogramming.
  • Zong Ming Chua, B.S.
    Zong Ming's work focuses on understanding the aging process through altering the stability of the epigenome.
  • Jordan Friedlein, M.S.
    Jordan's work will focus on using mouse models and genetic engineering techniques to identify mutations in cancer cells that act as a lifeline to many cancer types.
  • Joe Fromm, B.S.
    Joe’s research looks into the role of Fatty Acid Synthase in cancer metabolism and the mechanism by which the protein recognizes and cleaves the proper substrate.
  • Shea Grenier, M.S.
    Shea's work will contribute to investigating metabolic adaptations that promote the development and progression of Ras-mutant cancers.
  • Patrick Hagan, B.A.
    Patrick is joining the Cosford Lab where he will study how autophagy and ULK1/2 contribute to cancer therapy resistance and develop and test inhibitors to these targets to improve treatment outcomes.
  • Mallika Iyer, M.S.
    Mallika will be using structural bioinformatics to study the evolutionary conservation of protein conformational diversity and its relationship to function.
  • Rema Iyer
    Rema is interested in understanding the role of genetic and epigenetic factors in the progression of cancers and finding meaningful therapies for patients.
  • James Kent, B.S.
    James’ work focuses on determining the structure and function of both bacterial and human proteins using numerous structural biology techniques.
  • Shaun Lim
    Shaun's work explores the molecular and cellular mechanisms that regulate autophagic flux and their implications on aging using C. elegans as a model.
  • Tianhui Liu, B.S.
    Tianhui is interested in contribution of autophagy in stress-induced cellular senescence.
  • Ryan Loughran, B.S.
    Ryan is working to uncover new and important roles of phosphoinositide lipid kinase signaling in the context of tumor cell metabolism.
  • Michaela Lynott, B.S.
    Michaela’s research focuses on identifying novel cardiac disease-associated pathways and innovative cardiac regenerative strategies using in vitro models and an automated screening platform.
  • Rachael McVicar, B.S.
    Rachael’s research aims to characterize proximal lungs cells by unique cell surface markers in order to increase the efficiency of lung differentiation protocols and enrich the target cell populations.
  • Tatiana Moreno, B.A.
    Tatiana will explore how autophagy is regulated upon hormetic stress and aging in the nematode C. elegans and mammalian/human systems.
  • Ruslan Nuryyev, M.S.
    Ruslan’s research will be focused on examining progenitor cells in a hypothermic environment in an effort to develop a neuroprotective treatment for hypoxic-ischemic encephalopathy.
  • Utkarsha Paithane
    Utkarsha’s research will be focused on studying genetic mutations that contribute to cancer initiation.
  • Adarsh Rajesh
    Adarsh is interested in using cell biology and bioinformatic techniques to unlock the cellular mechanisms behind aging and age-associated diseases.
  • Stephen Sakuma, B.S.
    Stephen's work focuses on elucidating the role of modulating nuclear pore complex composition and assembly at the cellular and organismal level.
  • Paloma Sanchez Pavon, B.S.
    Paloma studies the role that lysophosphatidic acid (LPA) plays in a neurological disease called hydrocephalus, trying to counteract its effects and improve the life of the patients.
  • Cedomir Stamenkovis
    Ceda is interested in studying muscle stem cells and is utilizing mouse genetic models to understand how loss of heterogeneity of muscle stem cells is linked to the depletion of muscle mass that occurs in aging.
  • Benjamin Van Espen, M.S.
    Benjamin’s research focuses on signaling pathways that are deregulated in cancer, putting an emphasis on the importance of ubiquitin ligases, which control cellular response to diverse stress stimuli.
  • Jiaqian (Emily) Wu, M.S.
    Emily’s research focuses on developing small drug inhibitor for cancer therapeutics and neuropsychiatric disorders.
  • Sviatlana Zaretski
    Sviatlana is interested in studying the role of autophagy in such age-associated phenomena as cellular senescence, to understand the interplay of the key components of autophagy involved in cellular senescence and describe how autophagy is being re-modelled upon entering senescence to find possible interventions and promote healthy aging.
  • Zhouting Zhu, M.S.
    Zhouting will investigate the RNA methylation pathways and their impact on cancer development as well as identification of small molecule inhibitors of targets involved in cancer.

Alumni

"Sanford Burnham Prebys Medical Discovery Institute graduate students are bright and highly driven with a clear focus on their next career step. Upon graduation, most of our students have moved on to become successful biomedical researchers in both fields of industry and academia."

– Malene Hansen, Ph.D.
Associate Dean for Student Affairs
Cameron Pernia, Ph.D.

"A great feature of Sanford Burnham Prebys graduate school is its size, we have more faculty members than students, so I have easy access to mentors. I could not be happier with my decision to pursue my Ph.D. here, and I am confident it will be one of the best choices I will ever make."

Marisa Sanchez, Ph.D.

"I chose to study at Sanford Burnham Prebys Medical Discovery Institute because it is leading the frontiers of translational biomedical research. I have always had a fascination for research and discovering new ways to improve the lives of people suffering from disease."

Miguel Reina Campos, Ph.D.

"I was drawn to Sanford Burnham Prebys for its clinically oriented goals, state of the art facilities and the great talent that inhabits the institution. It appeared to me as the perfect blend of the will to cure and the genuine curiosity that drives the finest basic research."

2021
  • J. Scotty Cadet
    Ph.D. in Biomedical Sciences
    Thesis Title: Mannose Supplement and SGK1 Attenuation Enhance EGFR-Targeted Therapy
  • Huiyu Ren
    Ph.D. in Biomedical Sciences
    Thesis Title: Discovery of Novel Cancer Therapeutics by Targeting the ULK1/2 Autophagy Initiation Complex
2020
  • Numana Bhat
    Ph.D. in Biomedical Sciences
    Thesis Title: Regnase-1 is essential for B cell homeostasis to prevent autoimmunity
  • Daniel Ojeda Juarez
    Ph.D. in Biomedical Sciences
    Thesis Title: Lipocalin-2 mediates neuronal damage and behavioral deficits in HIV-induced brain injury
  • Pavel Ryzhov
    Ph.D. in Biomedical Sciences
    Thesis Title: Structural Studies of Bcl-2 Family Proteins in Lipid Bilayers
  • Jessica Stupack
    Ph.D. in Biomedical Sciences
    Thesis Title: Novel roles for the AD risk factor SORLA in neurite outgrowth and synaptic protection
     
2019
  • Clyde Campbell
    Ph.D. in Biomedical Sciences
    Thesis Title: In vivo Lineage Conversion of Vertebrate Muscle into Early Endoderm-Like Cells
    Current Position: Adjunct Assistant Professor at Iowa State University

  • Alex Campos
    Ph.D. in Biomedical Sciences
    Thesis Title: TXNRD1 Mediated Regulation of the Wnt/β-catenin Pathway in Colorectal Cancer
    Current Position: Postdoctoral Fellow, David Cheresh lab, UC San Diego

  • Lisa Elmen
    Ph.D. in Biomedical Sciences
    Thesis Title: From Disease Promotion to Therapeutics - the Multifaceted Roles of Gut Bacteria
    Current Position: Postdoctoral Fellow, Peterson lab at Sanford Burnham Prebys Medical Discovery Institute

  • Anjali Gupta
    Ph.D. in Biomedical Sciences
    Thesis Title: CRTC Signaling in the Heart of the fruit fly Drosophila melanogaster
    Current Position: Postdoctoral Fellow, Ocorr lab at Sanford Burnham Prebys Medical Discovery Institute

  • Cameron Pernia
    Ph.D. in Biomedical Sciences
    Thesis Title: Hyper-Excitable Neurons Produce Hypo-Functional Neuronal Networks: Evidence from Modeling CRMP2 in Bipolar Disorder

  • Miguel Reina Campos
    Ph.D. in Biomedical Sciences
    Thesis Title: Increase Serine and One-Carbon Pathway Metabolism by PKC Lambda/Iota Deficiency Promotes Neuroendocrine Prostate Cancer

  • Marisa Sanchez
    Ph.D. in Biomedical Sciences
    Thesis Title: Coordination of Adaptive and Pro-apoptotic Responses to Oxidative Stress at the mRNA Translation Level

2018
  • Francesca Boscolo Sesillo
    Ph.D. in Biomedical Sciences
    Thesis Title: Role of p53 in balancing self-renewal, myogenic commitment, and cellular transformation of muscle stem cells
    Current position: Postdoctoral research fellow, Alperin lab at University of California San Diego

  • Monica Gonzalez
    Ph.D. in Biomedical Sciences
    Thesis Title: The role of caspases in inflammation
    Current Position: Postdoctoral Fellow, Newton lab in the Institutional Research and Academic Career Development Award (IRACDA) program at University of California San Diego

  • Marco Maruggi
    Ph.D. in Biomedical Sciences
    Thesis Title: Elucidating the Mechanisms Underlying Resistance to Targeted Therapy in Pancreatic Cancer
    Current Position: Postdoctoral Associate, Powis lab at Sanford Burnham Prebys Medical Discovery Institute

  • Wesley McKeithan
    Ph.D. in Biomedical Sciences
    Thesis Title: Reengineering an Antiarrhythmic with Human Pluripotent Stem Cells
    Current Position: Postdoctoral Scholar, Lim lab at University of California San Francisco

  • Róisín Puentes
    Ph.D. in Biomedical Sciences
    Thesis Title: Targeting the CNK1 PH domain to inhibit mutant KRAS cancer growth

  • Amir Razai
    Ph.D. in Biomedical Sciences
    Thesis Title: Biochemical Toolbox: New Strategies for the Characterization and Inhibition of Proteases

  • Tiara Wong
    Ph.D. in Biomedical Sciences
    Thesis Title: Using iPSC-derived mesenchymal ​stromal cells to study fibrosis in ​Arrhythmogenic Right Ventricular Dysplasia/Cardiomyopathy

2017
  • Jinsha Liu
    Ph.D. in Biomedical Sciences
    Thesis Title: T-cadherin and Adiponectin in hippocampal synaptic functions and behaviors
    Current Position: Postdoctoral Scientist, Eli Lilly & Company

  • Gianluigi Lichinchi
    Ph.D. in Biomedical Sciences
    Thesis Title: Dynamics of RNA methylation during HIV and ZIKV infections
    Current Position: Postdoctoral Scientist at Roche

  • Khooshbu Shah
    Ph.D. in Biomedical Sciences
    Thesis Title: Pathological Interactions of Arrhythmogenic Right Ventricular Dysplasia/Cardiomyopathy (ARVD/C) Cardiomyocytes with ARVD/C Mesenchymal Stromal Cells
    Current Position: Applications Scientist at Bio-Techne

  • Victoria Thaney
    Ph.D. in Biomedical Sciences
    Thesis Title: Neuroprotection by IFN-beta in HIV/gp120 Brain Injury
    Current Position: HCA Technical Sales Specialist at Thermo Fisher Scientific

2016
  • Paula Coutinho Toto
    Ph.D. in Biomedical Sciences
    Thesis Title: Regulation of Skeletal Muscle Cell Quiescence, Proliferation and Differentiation by Brahma-based SWI/SNF Chromatin-Remodeling Complex
    Current Position: Associate Faculty at Mira Costa College

  • Alessandra Dall'Agnese
    Ph.D. in Biomedical Sciences
    Thesis Title: MYOD-directed changes in the nuclear architecture during myogenic conversion of somatic cells
    Current Position: Postdoctoral Associate at the Whitehead Institute

  • Mirco Guigli
    Ph.D. in Biomedical Sciences
    Thesis Title: Investigation of Structured Illumination Confocal Microscopy for High Content Screening
    Current Position: Instrumentation Engineer at Vala Sciences

  • Stephen Soonthornvacharin
    Ph.D. in Biomedical Sciences
    Thesis Title: Systems-Level Analysis to Elucidate the Regulation of the RIG-I-Mediated Antiviral Innate Immune Response
    Current Position: Research Scientist I at Tocagen

  • Matthew Tierney
    Ph.D. in Biomedical Sciences
    Thesis Title: Regulatory mechanisms controlling muscle stem cell behavior during skeletal muscle repair
    Current Position: Postdoctoral Fellow in Fuchs Lab at Rockefeller University

2015
  • Giuseppina Claps
    Ph.D. in Biomedical Sciences
    Thesis Title: Redefining AFT2 in Braf-driven melanoma
    Current Position: Postdoctoral Associate at Institut Gustave Roussy

  • Yi Ding
    Ph.D. in Biomedical Sciences
    Thesis Title: Structural and Functional Studies of the Outer Membrane Protein Ail from Yersenia Pestis
    Current Position: Data Scientist at Sysco

  • Sara Gelino
    Ph.D. in Biomedical Sciences
    Thesis Title: Investigating the Mechanisms of Autophagy-Mediated Longevity During Dietary Restriction
    Current Position: Project Manager at Anza Innovations

  • Saumya Nagar
    Ph.D. in Biomedical Sciences
    Thesis Title: Role of MEF2 in photoreceptor degeneration

2014
  • Angel Bottini
    Ph.D. in Biomedical Sciences
    Thesis Title: Drug Discovery Studies on Influenza A Virus and Yersinia Outer Protein H (YopH)
    Current Position: Assistant Project Scientist at University of California San Diego

  • Ryan Esquejo
    Ph.D. in Biomedical Sciences 
    Thesis Title: Integration of Lipid Synthesis and Other Biological Processes via Sterol Regulatory Element Binding Proteins
    Current Position: Senior Scientist, Biology at Pfizer

  • Domenico Fasci
    Ph.D. in Biomedical Sciences 
    Thesis Title: New Insights into the Regulation of SUMO Dynamics by the Human SUMO-specific Proteases (SENPs) 
    Current Position: Postdoctoral Fellow at Universiteit Utrecht, The Netherlands

  • Lorenzo Giordani
    Ph.D. in Biomedical Sciences 
    Current Position: Postdoctoral Fellow at the Institut de Myologie in Paris, France

  • Ryon Graf
    Ph.D. in Biomedical Sciences 
    Thesis Title: The Regulation of Breast Cancer Metastasis by Caspase-8 
    Current Position: Senior Biomarker Scientist at Epic Sciences

  • Janna Hachmann
    Ph.D. in Biomedical Sciences
    Thesis Title: Activity and Specificity of the Human Paracaspase MALT1
    Current Position: Manager Validation Fund, Berlin Institute of Health

  • Philip McQuary
    Ph.D. in Biomedical Sciences
    Thesis Title: Understanding the longevity of rsks-1/S6K C. elegant mutants
    Current Position: Director of Product Development, OncoCyte Corporation

  • Goonho Park
    Ph.D. in Biomedical Sciences
    Thesis Title: Investigation of Aberrant Epigenetic Mechanisms in Parkinson's Disease Pathogenesis
    Current Position: Postdoctoral Fellow in the lab of Dr. Edward Koo at UCSD

  • Judith Scheliga
    Ph.D. in Biomedical Sciences 
    Thesis Title: Role of elf3e in mRNA Translation 
    Current Position: Technical Applications Scientist at Illumina

  • Danhua Zhang
    Ph.D. in Biomedical Sciences
    Thesis Title: The Specification of Ductal Lineages in Liver and Pancreas
    Current Position: Postdoctoral Fellow in the lab of Dr. Farham Imam at UCSD

2013
  • Wenqing Cai 
    Ph.D. in Biomedical Sciences 
    Thesis Title: Stage-Specific Cell Fate Commitment During Cardiac Differentiation in mESCs 
    Current Position: Research Fellow at Boston Children's Hospital

  • Xin Wang
    Ph.D. in Biomedical Sciences 
    Thesis Title: Loss of Sorting nexin 27 Continues to Excitatory Synaptic Dysfunction Via Modulation of Glutamate Receptor Recycling in Down Syndrome 
    Current Position: Principal Investigator, School of Medicine at Xiamen University 

2012
  • Corrine Lee 
    Ph.D. in Biomedical Sciences 
    Thesis Title: Spinal Disinhibition in a Rodent Model of Painful Diabetic Neuropathy 
    Current Position: Postdoctoral Fellow in Dr. Mark Tuszynski's Lab at UCSD

  • Runquan Zhang
    Ph.D. in Biomedical Sciences 
    Thesis Title: Novel Synthetic Ligands of CCR5 and CXCR4: Biochemical Characterization and Preclinical Studies
    Current Position: Scientist at QoolAbs

2011
  • Cheng-Ho Chung
    Ph.D. in Biomedical Sciences
    Thesis Title: Adult Beta Cell Regeneration 
    Current Position: Physician, Mackay Memorial Hospital, Taipei, Taiwan

  • Johanna Samuelsson
    Ph.D. in Biomedical Sciences
 
    Thesis Title: DNA Demethylation of SST1 Pericentromeric Repetitive Elements in Human Cancer 
    Current Position: Gene Regulation and Product Services Manager at Active Motif

  • Ying Zhang
    Ph.D. in Biomedical Biosciences
 
    Thesis Title: Integrating Computational Structure-Function Analyses for the Genome-Scale Modeling of Metabolic Networks 
    Current Position: Assistant Professor at the University of Rhode Island

2009
  • Lorena Puto
    Ph.D. in Molecular Medicine

    Thesis Title: Epigenetic Control of Apoptosis and Autophagy Gene Expression and Promotion of Tumorigenicity by Nuclear Body Protein, Daxx
    Current Position: Faculty Member, Department of Medicine, Cedars-Sinai Medical Center, Los Angeles

  • Annelies Zinkernagel
    Ph.D. in Molecular Medicine

    Thesis Title: Exploring Bacterial Pathogen Interactions with Host Phagocytes to Identify Novel Approaches to Infectious Disease Therapy
    Current Position: Attending and Physician Scientist at University Hospital Zürich, Division of Infectious Diseases and Hospital Epidemiology

SBP Graduate School Alumni

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Graduate school faculty