Evan Snyder Archives - Sanford Burnham Prebys
Institute News

Evan Snyder named Fellow of the Child Neurology Society

AuthorScott LaFee
Date

May 28, 2025

Evan Snyder, MD, PhD, professor in the Center for Neurologic Diseases, has been named a Fellow of the Child Neurology Society, honoring a distinguished career and significant contributions in the field of child neurology.

Snyder, who is also a member of the Cancer Genome and Epigenetics Program at Sanford Burnham Prebys, is a longtime leader in pediatric neuroscience and stem cell research. He joined Sanford Burnham Prebys in 2003, and was founding director of its original Stem Cell Research Center.

The Child Neurology Society is a professional organization whose mission is to promote the optimal care of children with neurological and developmental disorders by providing education, advocacy and support for clinicians and researchers in the field.

Snyder was cited for his clinical expertise, research contributions and ongoing commitment to the mission of the Society. He is featured in the second edition of Child Neurology: Its Origins, Founders, Growth and Evolution, a collection of biographies detailing the lives of innovators in child neurology throughout history.

Institute News

Seven questions for FDA advisor Evan Snyder

AuthorGreg Calhoun
Date

November 11, 2024

Sanford Burnham Prebys physician-scientist advises the FDA on cell-based therapeutics, tissue engineering and gene therapies.

Sanford Burnham Prebys physician-scientist Evan Y. Snyder, MD, PhD, was reappointed to the Cellular, Tissue, and Gene Therapies Advisory Committee (CTGTAC) in the Center for Biologics Evaluation and Research (CBER) at the Food and Drug Administration (FDA). He is serving a four-year term from August 30, 2024, to March 31, 2028.

We sat down with Snyder to learn more about the committee, his advisory role and the importance of safeguards for new therapies.

What are FDA advisory committees?

The FDA advisory committees advise the FDA commissioner in many areas to support the agency’s mission of protecting and promoting public health. This includes advising on whether or not new treatments or other products under the agency’s purview should be approved to enter the marketplace.

There are many committees that focus on topics ranging from food and tobacco products to digital health and veterinary medicine. My committee oversees cell-based therapeutics, tissue engineering and gene therapies.

Who serves on these committees?

Typically, committees have between 12-16 members. Most are academics with complementary sets of expertise. My committee includes individuals proficient in stem cell biology, gene therapy, biomedical engineering, surgery, biostatistics and clinical trial design, among others.

Other members often include a non-voting ex officio industry representative and a voting patient advocate representative. And, for each meeting, you can “roll-in” ad hoc people that have a particular expertise on the topic that’s being discussed.

What is your history on the Cellular, Tissue, and Gene Therapies Advisory Committee?

In the early days of the stem cell field, I was a founding member of the FDA and National Institutes of Health (NIH) Stem Cell Working Group to generate guidelines for human transplantation, and then served on the FDA’s Biological Response Modifiers Advisory Committee which derived from that Working Group, and which ultimately gave rise to the CTGTAC. I served as a recurring ad hoc member of CTGTAC for about eight years. In 2011, I was made acting chair of the committee. And then in 2012, I was appointed as permanent chair.

After my two-year term was complete, I was asked to stay on for a second two-year term. At that point, I hit my term limits and went into my “latency” period. Last year, I was asked to give the committee a lecture on what to look for in reviewing cell-based therapies and cell-based therapy clinical trials. I guess they found my advice useful because I received an invitation to return to the committee.

Can you share a case where you learned a valuable lesson about regulation?

One sobering lesson was learned at my very first session. I was so excited about being on this committee, recognizing that we were the “gatekeepers” of health care for the country and had the  power to do such impactful things.

I received the materials to review for my first case — hundreds of pages. They were from a company that wanted to take skin biopsies obtained from the back of a patient’s ear, dissociate the sample into single skin cells and expand them in cell culture, and then send the cells back to a plastic surgeon who would inject them into the nasolabial fold of the donor patient to efface the aging-related furrows there and make the face look younger and pumper.

I confess that I was really having trouble getting invested in the case as I was expecting something more meaningful for us to adjudicate. And then, at lunch, one of the more senior committee members off-handedly remarked how important this case was. Because I could not tell if he was being sarcastic or earnest, I asked him (a bit sheepishly) to elaborate.

He responded that, while the matter may sound trivial, if our committee approved this “therapy”, it would represent only the second autologous cell-based therapy ever approved by the FDA. He added that, if we approve this one, practitioners could start using autologous cells (especially derived from skin) off-label for all kinds of indications whether we had investigated and sanctioned those uses or not.

That changed my perspective immediately. After deliberating, we denied the company approval based on a failure to prove adequate safety. For example, they hadn’t met the required bar for showing that the injected skin cells didn’t continue to proliferate inappropriately under certain common conditions. Also, the company had not followed the patients longitudinally enough to know the long-term outcome. They had not adequately characterized the cells they had expanded artificially in a tissue culture dish and were now transplanting.

How does the committee vote? 

We take two votes. First, we vote on whether the applicants have surpassed a threshold for safety. Then we take a second vote on whether they have met their burden for showing efficacy beyond standard-of-care.

When you vote, it’s like “American Idol.” You have a little switch in front of you, and you flip it to vote “yes” (green), “no” (red) or “abstain” (yellow). Your vote then goes up on a tally screen that all (including the public) can see.

At the end of each vote, each committee member has to explain the rationale for why he/she voted that way.

What is the most visible case you have reviewed?

We were asked to review a case related to what is commonly called “human cloning.” The scientific term is somatic cell nuclear transfer (SCNT). One takes a skin cell from a patient, removes the nucleus transfers it to an unfertilized egg (oocyte) whose own nucleus has been removed. Then you “zap” the egg with the donated nucleus, and the egg acts as if it has been fertilized. It begins to divide into 2 cells, then 4 cells, then 6 cells, and form a blastula, and ultimately — if allowed to go to beyond 14 days (which is typically not sanctioned in this country) — into an embryo that will be just like whoever donated that skin cell nucleus. These experiments are exceedingly controversial and actually allowing a human embryo to go to term is outlawed here and in most countries, although SCNT is used routinely for agricultural animals.

There is one indication, however, where SCNT could be therapeutically beneficial in humans. That is in the case of rare mitochondrial diseases which tend to be lethal or incapacitating. Mitochondria are the powerhouses of the cell; when they are diseased, the kids are born with heart, muscle, brain, eye, and/or liver disease — these are tissues that demand high energy.

The mitochondria and the genes encoding mitochondria come only from the mom, not from both parents. A skilled and esteemed reproductive biologist came to the committee with a proposal to perform SCNT for parents at high risk for having kids with mitochondrial disease. The skin cell nucleus from a mom carrying abnormal mitochondria would be placed in the unnucleated egg of a normal woman, which would then be fertilized by the dad in vitro. This was, of course, very contentious. Some members of the press said the procedure would create “three parent” babies and create monsters. There were protests.

Ultimately, our committee had to decide whether to approve a clinical trial or not. And that would help determine whether the U.S. would begin to embrace SCNT. We concluded that the disease represented a critical unmet medical need, requiring new interventions. We determined that the proposed strategy was a reasonable, albeit an arduous, approach if a couple wanted a baby with the genetic inheritance of both parents yet without abnormal mitochondria. However, in our view, the bar for safety had not yet been met (based on the preclinical animal studies). We provided a laundry list of studies that should be pursued before coming back to the committee.

The United Kingdom was considering the same issue. While the UK was holding hearings on the topic, I was summoned (as the committee’s chairman and, hence, the United States representative) to testify before the parliamentary committee, explaining our rationale for not approving a clinical trial for SCNT to treat mitochondrial disease.

Why is it important to you to serve on this committee?

As a physician, I make an impact on each kid I take care of, kid by kid. But there’s a limited number of kids that I can treat during my career. As a scientist, if I get it right, I can make an impact on thousands of patients, but that might not even occur in my lifetime.

On this committee, I can make an impact on potentially thousands of patients in the near term. That comes with a requirement for being incredibly rigorous in assessing the data we are presented with, as well as appreciating the practicalities of what it takes to actually do medicine and improve the lives of real patients in the real world — sometimes needing to make a decision in the face of incomplete and imperfect data. Forestalling a decision can be a decision in itself.

I think as an educator, as a physician, and as a scientist, I have a unique set of skills that might make an impact here.

Institute News

New CIRM grant to fund research internships for underrepresented high school students

AuthorMiles Martin
Date

January 25, 2022

Thanks to a new grant awarded to Sanford Burnham Prebys by the California Institute for Regenerative Medicine (CIRM), 57 California high school students from underrepresented groups will have the chance to complete a paid internship at the Institute for the next five consecutive summers.

The $509,000 grant was awarded to Paula Checchi, PhD, Alessandra Sacco, PhD, and Evan Snyder, MD, PhD

The mission of CIRM is to accelerate stem cell research and provide treatment to patients with unmet medical needs. And although CIRM directly funds faculty, many of their initiatives also focus on training the next generation of stem cell researchers. Late last year, Sanford Burnham Prebys received $5 million from CIRM to fund new training programs aimed at PhD students and postdoctoral researchers.

“One of the benefits of a program like this is that we’ll be able to inspire students early to pursue biomedical research,” says Checchi, a principal investigators on the grant and longtime educator of high school and undergraduate students. “A lot of students might not even realize that pursuing a STEM degree is an option for them, and that’s something we want to change.” 

The new grant was awarded as part of CIRM’s SPARK Training Program, a diversity, equity and inclusion (DEI) initiative that targets high school students without access to summer research internship opportunities due to socioeconomic constraints. This grant is one of 11 awarded by CIRM to research institutions across California.

“At the high school level, a lot of research internships are unpaid, which can alienate a lot of students, especially if they’re also part of a group that isn’t represented well in scientific research to begin with,” says Checchi. “Programs like this help flip that script and will contribute to increased diversity in science over the long term.”

In addition to getting hands-on research experience, interns will also participate in community outreach, patient advocacy and other educational activities under the mentorship of experienced professors.

“The research element is obviously important, but programs like this also help students develop into confident, capable young scientists who are able to inspire those around them,” says Checchi. “We’re trying to plant the seed for these bright young minds to flourish.” 

Institute News

From child neurology to stem cells: An interview with Evan Snyder

AuthorMiles Martin
Date

November 18, 2021

What do Evan Snyder and Sigmund Freud have in common? Both radically changed how we see the human brain.

In a first for San Diego, Sanford Burnham Prebys Professor Evan Y. Snyder, MD, PhD has been featured in the second edition of Child Neurology: Its Origins, Founders, Growth and Evolution, a collection of biographies detailing the lives of innovators in child neurology throughout history. 

To celebrate this honor, we caught up with Snyder to discuss how his work in child neurology led him to make foundational discoveries in the fields of stem cell biology and regenerative medicine, as well as where these fields are headed in the future.

“Plasticity, both at the “macro” sociological level and at the “micro” clinical level, always fascinated me. And that fascination with resilience and my curiosity about its source led to my early discoveries surrounding stem cells in the brain.”

How does it feel to be included in this book?
Snyder: Ever since I was a student, I thumbed through the first edition and was inspired by all these old images of people from the early days of the field. To see my chapter in there along with the likes of Sigmund Freud is mind-blowing. It means a lot to be included. 

How did your work in child neurology lead you to work on stem cells?
Snyder: I was always interested in resilience. As a kid, I worked at a camp for children with various challenges: poverty, behavioral issues, disrupted home lives. These children were being raised in terribly deprived environments with challenging family situations, but they adjusted and bore up without complaint. When we took them out of that environment, even for a short time, they flourished. I never forgot that lesson. 

Later, doing my pediatric and neurology residencies and neonatology fellowship at Boston Children’s Hospital, I would care for babies in the newborn intensive care unit with seemingly devastating brain injuries. As a neurologist, I would often follow up with those kids months or even years later.

Despite the horrible injuries they had sustained as newborns, by the time they were children, some had recovered to the point where it was hard to notice a deficit—they were achieving their developmental milestones, were seizure-free off medications, and playing and interacting like normal kids.

It astounded me that some children could have that resilience while I knew that adults with those same injuries would likely be incapacitated. Plasticity, both at the “macro” sociological level and at the “micro” clinical level, always fascinated me. And that fascination with resilience and my curiosity about its source led to my early discoveries surrounding stem cells in the brain.

“There was no notion that there could be such regenerative cells in a solid organ, particularly one that was thought to be as static as the brain.”

How did your early work shape the stem cell field?
Snyder: Before I, and a few others, began examining the molecular biology of cell types that composed the brain, there really was no research area called the “stem cell field”—at least not for solid organs like the brain. What was known clinically about stem cells in the early ’80s was confined to the making of blood cells for bone-marrow transplants.

The goal of hematologists back then was to identify the youngest cell in the bone marrow that could give rise to other types of blood cells. That cell, called the hematopoietic stem cell, was difficult to isolate and identify, but it was always assumed to exist because a healthy person’s blood is always turning over.

There was no notion that there could be such regenerative cells in a solid organ, particularly one that was thought to be as static as the brain. ​My postdoctoral project at Harvard unexpectedly forced me to challenge that notion. I set out to study how the brain is put together by isolating all of its different cell types into separate containers, then building a miniature brain in a dish, cell by cell.

But from the very beginning, I had difficulty making containers of cells with a single specific identity, even if I started with what seemed to be a single cell and its identical sibling cells. The young cells I isolated always seemed to be changing their identities, even though they started out looking the same.

Colleagues observing my initial results assumed it was just an odd tissue culture artifact, but then I thought back to those kids with brain injuries for whom I’d cared, and I started thinking that maybe what I was observing wasn’t an artifact at all; maybe these cell types were one of the repositories of plasticity in the brain I had puzzled over—a “stem cell” of sorts.

To prove that notion, I quietly transplanted those stem cells into a mouse brain and waited two years to examine the brain. The cells I’d transplanted were not only still there but they had integrated into the fabric of the brain and taken on different identities depending on which part of the brain they took up residence.

This observation—which I made alone, in the middle of the night under a microscope—gave me chills that I still recall today.

I shuddered with excitement at the implication of what I was seeing. The central nervous system was always thought to be a part of the body that could not regenerate at all, yet here I had isolated cells from one mouse brain and used them to populate another brain with multiple cell types in multiple locations. I could make pots of those donor cells to be transplanted whenever and wherever I liked, like a bone-marrow transplant in the brain.

The potential seemed enormous, and my curiosity to see where that potential might lead in terms of understanding and healing the human brain became the focus of my lab—first at Harvard and then at Sanford Burnham Prebys.

“Finding how we could address unmet medical needs became somewhat like looking for a lock for which we already had a key.”

How did regenerative medicine enter the picture?
Snyder: Other people started finding stem cells, not only in the brain but everywhere in the body. In the mid-1990s, the focus then became figuring out how to exploit them. Those efforts helped give rise to the new field of regenerative medicine, where the emphasis is on repairing and regrowing tissues rather than just treating the symptoms of a disease. 

We found that we could put these neural stem cells almost anywhere in the nervous system, particularly if that region was diseased or injured—and hit the “reset button” for that region. I was more interested in studying the overall biology of this new cell type rather than focusing on any one illness. So, while learning about this cell, we found many different ways that its biology could be exploited therapeutically.

Finding how we could address unmet medical needs became somewhat like looking for a lock for which we already had a key. Looking for those locks—the therapeutic obstacles that stem cell biology might help circumvent—is where my clinical experience proved handy. 

One example was brain tumors. I’m not an oncologist, but I’d learned from my studies that stem cells will naturally go to regions where pathology exists in the brain, even over long distances from their point of implantation. So, by putting a therapeutic gene into a neural stem cell, I could use that cell like a “heat-seeking missile” to deliver that gene and its product to where it might be needed.

Brain tumors are often so difficult to cure because we can’t safely access all the brain areas where the tumor has infiltrated. The neural stem cell seemed a perfect way to deliver a tumor-killing gene to those disseminated tumor cells simply by harnessing their natural powers. That strategy has now moved into clinical trials, and the use of stem cells to deliver therapeutic genes is being used for other conditions as well.

What came next in the history of stem cells?
Snyder: If we fast-forward a few decades from the beginnings of regenerative medicine, we now know a lot more about the different “flavors” of stem cells, how they work, and how they can be therapeutic.

One of the new flavors of stem cells is induced pluripotent stem cells, or iPSCs. One can take a mature skin or blood cell and push it back to a state where it loses all of its organ identity, and then force it to become a completely different mature cell type.

In other words, plasticity can go in both directions: an immature cell type can take on multiple identities going forward in development, and a mature cell type can be pushed back in developmental time to the point where it can now make different choices. 

Importantly, that induced stem cell retains many of the characteristics of the person from which it originally came, including diseases and genetic defects that individual may have had. This realization gave rise to the idea of modeling diseases in a dish. 

This approach of using iPSCs works best for diseases where we know the specific cell type, pathway, gene, or protein that causes the disease, but we wondered if iPSCs could help for diseases where we have no clue which gene, protein, cell type, or pathway is causing a particular disease. 

Psychiatric disorders are the poster children for such complex and mysterious diseases. To date, there’s no psychiatric disease that we can attribute to a specific defect in a particular gene or protein. Nevertheless, I felt confident that we could use iPSCs to discover the underlying cause of challenging diseases where we have no prior knowledge of what has gone wrong.

I decided to zero in on bipolar disorder because, as a physician, I knew that this condition did have an effective treatment—lithium—which had been accidentally discovered many years ago without knowing why it seemed to help some patients.

I reasoned that If we knew lithium’s target, we could work backward, recognizing that whatever lithium was changing was the underlying cause of bipolar disorder. That strategy worked. We used the iPSCs to map the lithium-response pathway, and we learned that errors in the regulation of that pathway were the likely cause of bipolar disorder. With that in mind, we could discover drugs better than lithium.

In this branch of regenerative medicine, it’s not the stem cell that goes into the patient, but rather the drug discovered by the stem cell that goes into the patient, but this would not be possible if we could not use stem cells to give us those patient-specific disease models.

“Organs and their diseases never involve just one type of cell. If we want to improve the way we model diseases, we need to re-create and target that complexity.”

Where is the field going from here?
Snyder: Our models for diseases are only going to get better. We’re moving away from looking at small numbers of homogenous cells in a flat dish toward creating more complex three-dimensional mini-organs from a patient’s stem cells, directing those cells to become the many different interacting cell types that make an organ.

Organs and their diseases never involve just one type of cell. If we want to improve the way we model diseases, we need to re-create and target that complexity.

As far as using stem cells directly for therapy, we’re becoming much more sophisticated in deriving the cell type we need and directing it to the specific regions in need of repair. Furthermore, as our three-dimensional representations of organs in a dish become more sophisticated, these mini-organs may themselves become the material we transplant.

I’m also certain that there are applications for stem cells we haven’t conceived of yet.

Every generation of scientists needs to be reminded that one is constantly going to be surprised; one’s initial hypotheses, based on old understandings, are likely going to be wrong. One must be prepared to revise those hypotheses when the data—even if counter to expectations—leads one in an unconventional or inconvenient direction.

Although we’ve made much progress in the stem cell field over the past 30 years, there’s so much we don’t know. And, even when we think we know something, we probably don’t. None of my work would have been possible if I’d kept my blinders on and not been able to see the connections between different areas in which I was working—including allowing my work in the clinic and as a social worker to inform my scientific vision. That mindset is critical to the future of science.

Institute News

Hospitals were full. One scientist stepped up.

AuthorMonica May
Date

February 10, 2021

Sanford Burnham Prebys physician-scientist Evan Snyder spent two weeks in a gymnasium-turned-ICU, where he cared for people with severe COVID-19

The novel coronavirus has hit California hard, but one area that has been particularly impacted is Imperial County. Last spring, the rural farming region’s two hospitals became overwhelmed with COVID-19 cases—prompting a college basketball stadium to be converted into a makeshift intensive care unit (ICU). Soon, qualified personal were also needed.

Stem cell scientist Evan Snyder, MD, Ph.D., may not be the first person you would think to call on during such an emergency. But as a physician-scientist who works with critically ill newborns, he knows his way around an ICU. He knows how to run ventilators. And perhaps most importantly, he had an urgent desire to help.

“I had already decided I would study this disease from a scientific perspective,” says Snyder, who is working with UC San Diego’s Sandra Leibel, MD, to use mini lungs” to understand why some people with COVID-19 fare worse than others. “But as I started to see the public health menace it became, I felt like I needed to do more.”

Snyder started to sign up for every volunteer opportunity he could find. However, it wasn’t until the December post-holiday surge in cases when he was deployed to serve in the field. Through the California Medical Assistance Team (CAL-MAT), a group of highly trained medical professionals who provide assistance during disasters, Snyder was deployed to the gym-turned-ICU in Imperial County.

“Although our research examines the impact of the virus on lung cells created from people of many racial and ethnic backgrounds, the degree of disease disparity didn’t hit me at a gut level until this work,” says Snyder. “There’s no question that COVID-19 is unfairly hitting people who are socio-economically challenged and have co-morbidities such as diabetes and hypertension, which are the often the products of a disadvantaged environment.”

“I was like a vampire”

For two weeks Snyder worked through the night, taking down medical histories; giving people oxygen, providing medications such as dexamethasone, remdesivir, anticoagulants and antibiotics; carefully turning people onto their stomachs to ease breathing difficulties or helping individuals walk. He also saw clear patterns emerge.

All of the people he treated had conditions that are linked to poverty. More than 20% of people living in Imperial County live below the poverty line—double the national average. As a result, residents may be more likely to obtain food from food banks and may not have access to regular healthcare—which together can lead to conditions such as diabetes, hypertension or obesity. Many of the people whom Snyder cared for shared that they lived in small quarters with multiple generations, which made quarantining difficult, if not impossible.

“Some people who live in La Jolla and test positive have the luxury of living in a big house. They can afford not to go to work and stay in a separate bedroom while the rest of the family quarantines,” says Snyder. “The people I took care of can’t do that. We need to create places where people who test positive for COVID-19 can quarantine safely away from their families.”

Carrying insights back to the lab

Snyder’s experience has directly informed several new research avenues he plans to pursue.

“We already model real-world COVID-19 infections with ‘mini lungs’ created from different genders and races,” explains Snyder. “But this taught me that we need to better mimic the conditions present in a person who has diabetes or other conditions that create an adverse milieu for their organs and cells.”

This work also imprinted upon him that COVID-19 is more than a lung condition. The risk of blood clots causing strokes, heart attacks or blocking blood flow to the lungs was an ever-present concern.

“It wasn’t just about giving people more oxygen,” says Snyder. “This showed me that we need to focus even more on the vascular and inflammatory components of this disease.”

Lives were saved

Snyder is relieved to report that no lives were lost during those two weeks. He credits the care given—even if relatively primitive—to this success.

“If we weren’t doing what we were doing, about 30% of the people there would have died. And another 30% would have been left with lifelong impairments,” says Snyder. “However, in order to truly tame this virus, we need to find effective drugs, continue to vaccinate as many people as possible and exercise logical public health precautions.”

 

Institute News

Our top 10 discoveries of 2020

AuthorMonica May
Date

December 14, 2020

This year required dedication, patience and perseverance as we all adjusted to a new normal—and we’re proud that our scientists more than rose to the occasion.

Despite the challenges presented by staggered-shift work and remote communications, our researchers continued to produce scientific insights that lay the foundation for achieving cures.

Read on to learn more about our top 10 discoveries of the year—which includes progress in the fight against COVID-19, insights into treating deadly cancers, research that may help children born with a rare condition, and more.

  1. Nature study identifies 21 existing drugs that could treat COVID-19

    Sumit Chanda, PhD, and his team screened one of the world’s largest drug collections to find compounds that can stop the replication of SARS-CoV-2. This heroic effort was documented by the New York Times, the New York Times Magazine, TIME, NPR and additional outlets—and his team continues to work around the clock to advance these potential treatment options for COVID-19 patients.

  2. Fruit flies reveal new insights into space travel’s effect on the heart

    Wife-and-husband team Karen Ocorr, PhD, and Rolf Bodmer, PhD, shared insights that hold implications for NASA’s plan to build a moon colony by 2024 and send astronauts to Mars.

  3. Personalized drug screens could guide treatment for children with brain cancer

    Robert Wechsler-Reya, PhD, and Jessica Rusert, PhD, demonstrated the power of personalized drug screens for medulloblastoma, the most common malignant brain cancer in children.

  4. Preventing pancreatic cancer metastasis by keeping cells “sheltered in place”

    Cosimo Commisso, PhD, identified druggable targets that hold promise as treatments that stop pancreatic cancer’s deadly spread.

  5. Prebiotics help mice fight melanoma by activating anti-tumor immunity

    Ze’ev Ronai, PhD, showed that two prebiotics, mucin and inulin, slowed the growth of melanoma in mice by boosting the immune system’s ability to fight cancer.

  6. New test for rare disease identifies children who may benefit from a simple supplement

    Hudson Freeze, PhD, helped create a test that determines which children with CAD deficiency—a rare metabolic disease—are likely to benefit from receiving a nutritional supplement that has dramatically improved the lives of other children with the condition.

  7. Drug guides stem cells to desired location, improving their ability to heal

    Evan Snyder, MD, PhD, created the first drug that can lure stem cells to damaged tissue and improve treatment efficacy—a major advance for regenerative medicine.

  8. Scientists identify a new drug target for dry age-related macular degeneration (AMD)

    Francesca Marassi, PhD, showed that the blood protein vitronectin is a promising drug target for dry age-related macular degeneration (AMD), a leading cause of vision loss in Americans 60 years of age and older.

  9. Scientists uncover a novel approach to treating Duchenne muscular dystrophy

    Pier Lorenzo Puri, MD, PhD, collaborated with scientists at Fondazione Santa Lucia IRCCS and Università Cattolica del Sacro Cuore in Rome to show that pharmacological (drug) correction of the content of extracellular vesicles released within dystrophic muscles can restore their ability to regenerate muscle and prevent muscle scarring.

  10. New drug candidate reawakens sleeping HIV in the hopes of a functional cure

    Sumit Chanda, PhD, Nicholas Cosford, PhD, and Lars Pache, PhD, created a next-generation drug called Ciapavir (SBI-0953294) that is effective at reactivating dormant human immunodeficiency virus (HIV)—an approach called “shock and kill.”

Institute News

Stem cell Prop. 71 saved lives. It’s successor, Prop. 14, will save more—maybe yours.

AuthorEvan Y. Snyder, MD, PhD
Date

November 2, 2020

Those who argue that Proposition 14—which will continue to fund stem cell research that foresightful Californians approved in 2004 via Proposition 71—is no longer necessary unfortunately have a narrow view of stem cell science.

All one needs to do is to think back to our world before California’s emergence as the “Mecca” for this science to realize how different—for the better —we are and can continue to be in this state.

These accomplishments extend beyond the numbers. Yes, CIRM has enabled more than 90 clinical trials involving more than 4,000 patients with more than 75 diseases; produced more than 800 patent applications; published more than 3,000 contributions to scientific knowledge in the form of peer-reviewed papers; and created numerous new jobs, companies and programs that drew tax-paying citizens to California from other states.

And yes, there have been actual cures. Bone marrow transplantation is a stem cell-based therapy that has the ability to cure conditions such as sickle cell anemia, “bubble baby” disease, certain cancers, metabolic diseases, even HIV. CAR T-cell therapy, one of the newest and most exciting cell-based treatments against a range of cancers, is a stem cell-based therapy. Novel drugs can now cure formerly incurable cancers because they attack cancer stem cells. 

And indeed, there are now treatments on the horizon for devastating maladies. People living with spinal cord injury, brain conditions such as multiple sclerosis, Parkinson’s disease, and stroke; eye conditions such as macular degeneration; psychiatric disorders; diabetes; even COVID-19, can hope for a better future because of stem cells’ ability either to address the problem directly, or to make therapeutic “caregiver” molecules, or to better model the disease(s) to enable novel drug discovery. 

However, stem cell biology’s most profound legacy is likely how it has changed society’s vision of itself. When it comes to our life, we have come to view ourselves not as rigid beings, but flexible, malleable creatures who accept no boundaries—because we know the repairing power of stem cells. 

Alzheimer’s patients are no longer institutionalized but rather placed in enriched environments. Children with autism are given aggressive early intervention. Parkinson’s patients are taught ballroom dancing. 

We are encouraged to exercise into old age and to take up challenging tasks to keep our brains sharp. All of these notions are stem cell biology’s contribution to our very nature and our perceptions of being human.

Indeed, passing Proposition 14 may have the greatest immediate and lasting impact on most Californians’ well-being than any other measure on the ballot. And our use of these life-saving strategies is once again being threatened in Washington D.C., just as it was in 2004. Please continue this life-saving research by voting Yes on Proposition 14. 

Evan Snyder, MD, PhD, is professor and director of the Center for Stem Cells and Regeneration program at Sanford Burnham Prebys. He is regarded as one of the “fathers of the stem cell field” and was named a “stem cell revolutionary” by Forbes. Snyder was the first to isolate human neural stem cells, which will soon be tested as a treatment for premature newborns, and served two terms as Chairman of the FDA’s Cellular, Tissue, and Gene Therapy Advisory Committee. His lab explores the basic biology of stem cells and their therapeutic potential, particularly for brain disorders such as Parkinson’s disease and bipolar disorder.

Institute News

Scientists “turn back time” on cancer using new stem cell reprogramming technique

AuthorMonica May
Date

August 21, 2020

Discovery opens new research avenues that may help catch cancer early and identify potential preventive treatments

Scientists at Sanford Burnham Prebys Medical Discovery Institute have reprogrammed cancer cells back into their pre-cancer identity—opening new doors for studying how cancer develops and how it might be prevented. The research, published in Stem Cell Reports, may lead to tests that identify cancer early on, when it can be more easily treated, and uncover preventive treatments that stop cancer before it starts.

“We believe we have been able to contribute to one of the major goals of modern cancer research: creating next-generation models for studying how cancer develops from its earliest state,” says Evan Snyder, MD PhD, professor and director of the Center for Stem Cells & Regenerative Medicine at Sanford Burnham Prebys and senior author of the study. “We essentially took an adult cancer that has accumulated many mutations and pushed it back to the earliest stages of development, allowing us to emulate a tumor’s premalignant state. Then we watched cancer emerge from normal cells before our eyes.”

Turning back the clock on cancer 

In the study, the scientists set out to transform cells from anaplastic thyroid tumors—an aggressive, fast-growing cancer that is nearly always diagnosed at late stages—into induced pluripotent stem cells (iPSCs). These cells model the embryonic cells that are present at the earliest stages of human development and can become any cell in the body. While iPSCs are used today to create unlimited supplies of cells for research and therapeutic purposes—usually to correct abnormalities—the scientists recognized that tumor-derived iPSCs could be used to study the development of cancer.

However, this feat turned out to be easier said than done. The standard reprogramming method didn’t work, requiring the researchers to hunt for a different method that would induce the cancer cells to reset. Inhibiting a protein called RAS was the key ingredient that coaxed these thyroid cancer cells to become normal iPSC cells.

“We have named the pathway that is critical for making a cancer cell act as if it were a normal cell its ‘reprogram enablement factor,’” explains Snyder. “That factor will likely be different for every cancer and, in fact, may help in defining that cancer type.

“For this cancer type, which we examined in our study as a proof-of-concept, the reprogram enablement factor turned out to be blunting an overactive RAS pathway,” Snyder continues. “Our results suggest that losing control of RAS was the ‘big bang’ for this cancer—the very first event that leads to out-of-control cell growth and development of a tumor.”

The scientists next plan to reprogram additional cancers—including brain and lung cancer—into iPSCs to determine their “reprogram enablement factors.” If successful, they will next map the molecular changes that occur immediately before and after the tumors develop, which could reveal early signals of cancer and new preventive or early treatment measures.

“Unlike other cells, cancer cells are notoriously resistant to reprogramming,” says Snyder. “Our study is the first to successfully reprogram cancer cells into completely normal iPSCs, which opens new doors for cancer research.”

A team effort

The first author of the study is Yanjun Kong of Sanford Burnham Prebys and Shanghai Jiao Tong University. Yang Liu of Sanford Burnham Prebys is a co-corresponding author. Additional study authors include Ryan C. Gimple of UC San Diego; Rachael N. McVicar, Andrew P. Hodges and Jun Yin of Sanford Burnham Prebys; and Weiwei Zhan of Shanghai Jiao Tong University.

This study was funded by the Stem Cell Research Center & Core Facility at Sanford Burnham Prebys and by the China Scholarship Council (201606230202). The study’s DOI is 10.1016/j.stemcr.2020.07.016.

Institute News

COVID-19: Using “mini lungs” to understand why some people fare worse than others

AuthorMonica May
Date

April 24, 2020

Evan Snyder tells us how he is using lung organoids to find effective treatments for COVID-19. 

As the novel coronavirus races around the globe, mystifying patterns are emerging. The virus seems to hit some people hard—including men, people over the age of 65 and individuals with pre-existing medical conditions. For others, particularly children, the symptoms may be mild or even nonexistent.

To understand why these disparities occur, stem cell expert Evan Snyder, MD, PhD, director of Sanford Burnham Prebys’ Center for Stem Cells and Regenerative Medicine, is turning to lung organoids—3D structures that replicate human lungs. 

We caught up with Snyder to learn more about these “mini lungs” in a dish—and how the outbreak has impacted his lab.

Why did you create these organoids?
A neonatologist who works in my lab, Sandra Leibel, MD, originally developed these organoids to see if we could help babies who have trouble breathing. Premature babies, and some full-term babies born with genetic conditions, can’t make surfactant—the material that allows the lungs to be flexible and breathe. The severe respiratory distress that is thought to kill some people with severe COVID-19 is actually the adult version of what these babies experience. 

I’m happy to report that, using this model, Sandra was able to find a therapy that might help these infants with the previously untreatable genetic condition. I’m hoping we can learn from this success to help people with severe COVID-19 and “adult respiratory distress syndrome.” 

How are these lung organoids made? 
We start with human induced pluripotent cells (hiPSC) created from skin cells and turn these into lung cells using the same chemical signals our body uses. Then the exciting part comes: We transform these cells from flat, two-dimensional layers into three-dimensional spheres that grow the way a lung would—aka “mini lungs in a dish.” Sandra, along with technician Alicia Winquist and Sanford Burnham Prebys graduate student Rachael McVicar, figured out the “secret sauce” the cells need to complete this process. 

What makes these lung organoids so special?
Lungs are very complicated organs. They have many cell types and structures that all interact with each other: air sac cells that make surfactant, airway cells, immune cells, blood vessel cells; and cells with cilia, tail-like organelles that whip around and clear out debris. Our organoids contain all these different parts, so they can be used to model human disease more closely than single layers of cells. They’re also easier to scrutinize, manipulate and test treatments in animal models. These organoids let us ask and answer all sorts of interesting questions.

What do you hope to learn about COVID-19 using this model? 
We want to learn the basics about the virus that causes COVID-19, called SARS-CoV-2. For example, how does the virus infect human lung cells? What does the virus do after it enters the lung cell? How does the virus move from one lung cell to another? The answers to these questions will allow us to find effective treatments for COVID-19. 

In addition, we can use this model to determine why some people fare worse than others. We can compare organoids created from men and women; younger or older people; people exposed to various environmental toxins from smoking or vaping; people with diabetes, heart or kidney disease; and even people of different racial backgrounds or individuals who have genetic variations that affect their ability to fight infection. 

If we figure out why the virus affects some people differently, we can potentially create tailored treatments. For example, we can ask whether any disparities we observe can be compensated for simply by increasing a dose of a drug or by adding another drug. With our model, we may be able to find these answers relatively quickly so that as many people as possible can benefit from any breakthroughs.

Will you partner with additional Sanford Burnham Prebys scientists on this research? 
Yes, we are in a fortunate position to collaborate with Sumit Chanda, PhD, who just completed a heroic (and I do mean heroic) effort to screen 12,000 known drugs for COVID-19. He pinpointed 30 promising drugs, and now we will help him study exactly how these drugs are working in a system that is clinically relevant. For example, in what stage of the virus’s life are they disrupting? Which part of the cell’s function is being rescued? Using lung organoids, we can rank the effectiveness of each drug—and help Sumit winnow the list to the most promising drugs for close-to-immediate use.

The best approach to treat COVID-19 will most likely be with a drug cocktail, similar to how we treat other RNA viruses. For this reason, it’s important to know how each drug is working, because we want to attack the virus at multiple points in its life cycle and block toxic downstream effects. Our model will help us map this out and advance the most promising drug combinations. 

How has the outbreak affected your lab work? 
I have time-sensitive, patient-relevant work ongoing, so I am still coming into the lab. In addition to our COVID-19 work, we are preparing to launch a clinical trial using stem cells to help newborns who are at risk for cerebral palsy

However, things are very different now. When I do go in, there are only one or two people instead of dozens, and we work in shifts. We limit our time to a few hours and only come in a few days a week. What I really miss is the meeting of the minds. Some of the most inspirational science comes from sitting around in a group and sharing ideas. Or having someone walk over and look through your microscope at the primary data. We do our best with Zoom. But the in-person human interactions are the part of science I really miss. 
 

Institute News

First supercentenarian-derived stem cells created

AuthorMonica May
Date

March 19, 2020

Advance primes scientists to unlock the secrets of healthy aging.

People who live more than 110 years, called supercentenarians, are remarkable not only because of their age, but also because of their incredible health. This elite group appears resistant to diseases such as Alzheimer’s, heart disease and cancer that still affect even centenarians. However, we don’t know why some people become supercentenarians and others do not.

Now, for the first time, scientists have reprogrammed cells from a 114-year-old woman into induced pluripotent stem cells (iPSCs). The advance, completed by scientists at Sanford Burnham Prebys and AgeX Therapeutics, a biotechnology company, enables researchers to embark on studies that uncover why supercentenarians live such long and healthy lives. The study was published in Biochemical and Biophysical Research Communications.

“We set out to answer a big question: Can you reprogram cells this old?” says Evan Snyder, MD, PhD, professor and director of the Center for Stem Cells and Regenerative Medicine at Sanford Burnham Prebys, and study author. “Now we have shown it can be done, and we have a valuable tool for finding the genes and other factors that slow down the aging process.”

In the study, the scientists reprogrammed blood cells from three different people—the aforementioned 114-year-old woman, a healthy 43-year-old individual and an 8-year-old child with progeria, a condition that causes rapid aging—into iPSCs. These cells were then transformed into mesenchymal stem cells, a cell type that helps maintain and repair the body’s structural tissues—including bone, cartilage and fat.

The researchers found that supercentenarian cells transformed as easily as the cells from the healthy and progeria samples. As expected, telomeres—protective DNA caps that shrink as we age—were also reset. Remarkably, even the telomeres of the supercentenarian iPSCs were reset to youthful levels, akin to going from age 114 to age zero. However, telomere resetting in supercentenarian iPSCs occurred less frequently compared to other samples—indicating extreme aging may have some lasting effects that need to be overcome for more efficient resetting of cellular aging.

Now that the scientists have overcome a key technological hurdle, studies can begin that determine the “secret sauce” of supercentenarians. For example, comparing muscle cells derived from the healthy iPSCs, supercentenarian iPSCs and progeria iPSCs would reveal genes or molecular processes that are unique to supercentenarians. Drugs could then be developed that either thwart these unique processes or emulate the patterns seen in the supercentenarian cells.

“Why do supercentenarians age so slowly?” says Snyder. “We are now set to answer that question in a way no one has been able to before.”


The senior author of the paper is Dana Larocca, PhD, vice president of Discovery Research at AgeX Therapeutics, a biotechnology company focused on developing therapeutics for human aging and regeneration; and the first author is Jieun Lee, PhD, a scientist at AgeX.

Additional authors include Paola A. Bignone, PhD, of AgeX; L.S. Coles of Gerontology Research Group; and Yang Liu of Sanford Burnham Prebys and LabEaze. The work began at Sanford Burnham Prebys when Larocca, Bignone and Liu were members of the Snyder lab.

The study’s DOI is 10.1016/j.bbrc.2020.02.092.